Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH11P55287 AC025423.2-201ENST00000537570 439 ntBASIC5.48□□□□□ -1.53
CDH11P55287 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH11P55287 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH11P55287 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 LSM1P2-201ENST00000604911 322 ntBASIC5.48□□□□□ -1.53
CDH11P55287 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH11P55287 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 AC117490.2-201ENST00000610042 594 ntBASIC5.48□□□□□ -1.53
CDH11P55287 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CDH11P55287 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.48□□□□□ -1.53
CDH11P55287 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH11P55287 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CDH11P55287 WDR95P-201ENST00000425638 1542 ntBASIC5.48□□□□□ -1.53
CDH11P55287 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH11P55287 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH11P55287 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH11P55287 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
CDH11P55287 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH11P55287 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CDH11P55287 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 THAP12P8-201ENST00000447914 2115 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AC005224.3-201ENST00000584683 2140 ntBASIC5.47□□□□□ -1.53
CDH11P55287 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH11P55287 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CDH11P55287 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH11P55287 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH11P55287 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH11P55287 RN7SKP128-201ENST00000364270 303 ntBASIC5.47□□□□□ -1.53
CDH11P55287 NPM1P37-201ENST00000403105 874 ntBASIC5.47□□□□□ -1.53
CDH11P55287 RN7SKP166-201ENST00000410812 305 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH11P55287 AL354868.1-201ENST00000417077 482 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH11P55287 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH11P55287 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 AMYP1-201ENST00000440059 1023 ntBASIC5.47□□□□□ -1.53
CDH11P55287 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH11P55287 HMGN1P2-201ENST00000445197 310 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AC010240.2-201ENST00000445363 1205 ntBASIC5.47□□□□□ -1.53
CDH11P55287 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.47□□□□□ -1.53
CDH11P55287 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH11P55287 OR6C72P-201ENST00000451403 892 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH11P55287 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH11P55287 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH11P55287 AC068228.1-201ENST00000461723 211 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AC112184.1-201ENST00000505179 312 ntBASIC5.47□□□□□ -1.53
CDH11P55287 OR4D12P-201ENST00000509361 911 ntBASIC5.47□□□□□ -1.53
CDH11P55287 Y_RNA.710-201ENST00000516975 110 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH11P55287 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH11P55287 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.47□□□□□ -1.53
CDH11P55287 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH11P55287 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH11P55287 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH11P55287 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH11P55287 AP005136.2-201ENST00000583253 1049 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AC141002.1-201ENST00000607025 279 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AL591167.1-201ENST00000607321 456 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AC092681.3-201ENST00000609463 678 ntBASIC5.47□□□□□ -1.53
CDH11P55287 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.47□□□□□ -1.53
CDH11P55287 FAM27E2-201ENST00000619668 403 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AP001962.1-201ENST00000624114 559 ntBASIC5.47□□□□□ -1.53
CDH11P55287 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CDH11P55287 AL139254.3-201ENST00000641097 674 ntBASIC5.47□□□□□ -1.53
CDH11P55287 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH11P55287 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH11P55287 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
CDH11P55287 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH11P55287 AC090220.1-201ENST00000593078 1699 ntBASIC5.47□□□□□ -1.53
CDH11P55287 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH11P55287 AC138907.8-201ENST00000623981 2256 ntBASIC5.46□□□□□ -1.53
CDH11P55287 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH11P55287 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH11P55287 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH11P55287 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH11P55287 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDH11P55287 AL355834.1-201ENST00000556602 3965 ntBASIC5.46□□□□□ -1.53
CDH11P55287 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDH11P55287 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
CDH11P55287 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms