Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SMARCA2P51531 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
SMARCA2P51531 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SMARCA2P51531 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SMARCA2P51531 RNU1-43P-201ENST00000365052 165 ntBASIC9.98□□□□□ -0.81
SMARCA2P51531 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.98□□□□□ -0.81
SMARCA2P51531 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.98□□□□□ -0.81
SMARCA2P51531 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SMARCA2P51531 RPS3AP53-201ENST00000454716 778 ntBASIC9.98□□□□□ -0.81
SMARCA2P51531 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC9.98□□□□□ -0.81
SMARCA2P51531 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC9.98□□□□□ -0.81
SMARCA2P51531 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC9.98□□□□□ -0.81
SMARCA2P51531 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC9.98□□□□□ -0.81
SMARCA2P51531 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SMARCA2P51531 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC9.98□□□□□ -0.81
SMARCA2P51531 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SMARCA2P51531 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SMARCA2P51531 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC9.98□□□□□ -0.81
SMARCA2P51531 CPS1-IT1-201ENST00000628368 2306 ntBASIC9.98□□□□□ -0.81
SMARCA2P51531 CASC19-281ENST00000642118 1554 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA2P51531 AL031651.1-201ENST00000615357 1438 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SMARCA2P51531 MIR551A-201ENST00000385042 96 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AL353626.3-201ENST00000413399 657 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC007562.1-201ENST00000421819 517 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC011753.3-201ENST00000443436 406 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AC023274.2-201ENST00000445264 521 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA2P51531 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.97□□□□□ -0.81
SMARCA2P51531 RN7SKP99-201ENST00000517028 307 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC9.97□□□□□ -0.81
SMARCA2P51531 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC095055.1-201ENST00000603472 1113 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA2P51531 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA2P51531 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA2P51531 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA2P51531 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA2P51531 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC9.97□□□□□ -0.81
SMARCA2P51531 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA2P51531 AL034546.1-201ENST00000623740 3693 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC9.97□□□□□ -0.81
SMARCA2P51531 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SMARCA2P51531 AC010132.2-201ENST00000295493 1043 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 RN7SKP151-201ENST00000410230 316 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AC068138.1-201ENST00000412635 217 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AC016027.5-201ENST00000427227 210 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 RPS23P2-201ENST00000463671 415 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AC092490.3-201ENST00000545370 572 ntBASIC9.97□□□□□ -0.81
SMARCA2P51531 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC9.97□□□□□ -0.81
SMARCA2P51531 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
SMARCA2P51531 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA2P51531 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA2P51531 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC9.96□□□□□ -0.81
SMARCA2P51531 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA2P51531 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
SMARCA2P51531 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.96□□□□□ -0.82
SMARCA2P51531 OR55B1P-203ENST00000641518 2602 ntBASIC9.96□□□□□ -0.82
SMARCA2P51531 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC9.96□□□□□ -0.82
SMARCA2P51531 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
SMARCA2P51531 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
SMARCA2P51531 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 OLMALINC-203ENST00000641087 3779 ntBASIC9.96□□□□□ -0.82
SMARCA2P51531 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC9.96□□□□□ -0.82
SMARCA2P51531 PPP2R2DP1-201ENST00000420526 637 ntBASIC9.96□□□□□ -0.82
SMARCA2P51531 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.96□□□□□ -0.82
SMARCA2P51531 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.96□□□□□ -0.82
SMARCA2P51531 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 DUTP1-201ENST00000493631 470 ntBASIC9.96□□□□□ -0.82
SMARCA2P51531 AL121594.2-201ENST00000541658 472 ntBASIC9.96□□□□□ -0.82
SMARCA2P51531 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 AC008745.1-201ENST00000604064 271 ntBASIC9.96□□□□□ -0.82
SMARCA2P51531 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.96□□□□□ -0.82
SMARCA2P51531 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
SMARCA2P51531 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.95□□□□□ -0.82
SMARCA2P51531 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
SMARCA2P51531 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA2P51531 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA2P51531 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
SMARCA2P51531 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SMARCA2P51531 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.95□□□□□ -0.82
SMARCA2P51531 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC9.95□□□□□ -0.82
SMARCA2P51531 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.95□□□□□ -0.82
SMARCA2P51531 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
SMARCA2P51531 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC9.95□□□□□ -0.82
SMARCA2P51531 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms