Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
CASP4P49662 FUNDC2P3-201ENST00000334716 533 ntBASIC6.24□□□□□ -1.41
CASP4P49662 RNA5SP326-201ENST00000363209 110 ntBASIC6.24□□□□□ -1.41
CASP4P49662 OOSP1-201ENST00000398992 1270 ntBASIC6.24□□□□□ -1.41
CASP4P49662 AC096921.1-201ENST00000411661 375 ntBASIC6.24□□□□□ -1.41
CASP4P49662 HMGN1P20-201ENST00000411849 300 ntBASIC6.24□□□□□ -1.41
CASP4P49662 SLC20A1P1-201ENST00000413906 956 ntBASIC6.24□□□□□ -1.41
CASP4P49662 AC127526.2-201ENST00000426436 775 ntBASIC6.24□□□□□ -1.41
CASP4P49662 VN1R21P-201ENST00000426703 765 ntBASIC6.24□□□□□ -1.41
CASP4P49662 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.24□□□□□ -1.41
CASP4P49662 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.24□□□□□ -1.41
CASP4P49662 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.24□□□□□ -1.41
CASP4P49662 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.24□□□□□ -1.41
CASP4P49662 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.24□□□□□ -1.41
CASP4P49662 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CASP4P49662 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.24□□□□□ -1.41
CASP4P49662 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.24□□□□□ -1.41
CASP4P49662 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CASP4P49662 OR5D2P-201ENST00000524390 911 ntBASIC6.24□□□□□ -1.41
CASP4P49662 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.24□□□□□ -1.41
CASP4P49662 AC139697.1-201ENST00000548429 745 ntBASIC6.24□□□□□ -1.41
CASP4P49662 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.24□□□□□ -1.41
CASP4P49662 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.24□□□□□ -1.41
CASP4P49662 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.24□□□□□ -1.41
CASP4P49662 DHFRP1-201ENST00000579682 559 ntBASIC6.24□□□□□ -1.41
CASP4P49662 SETP3-201ENST00000581726 813 ntBASIC6.24□□□□□ -1.41
CASP4P49662 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.24□□□□□ -1.41
CASP4P49662 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.24□□□□□ -1.41
CASP4P49662 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.24□□□□□ -1.41
CASP4P49662 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
CASP4P49662 AL352984.2-202ENST00000613699 155 ntBASIC6.24□□□□□ -1.41
CASP4P49662 MIR6778-201ENST00000617912 73 ntBASIC6.24□□□□□ -1.41
CASP4P49662 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.24□□□□□ -1.41
CASP4P49662 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.24□□□□□ -1.41
CASP4P49662 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CASP4P49662 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CASP4P49662 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.23□□□□□ -1.41
CASP4P49662 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.23□□□□□ -1.41
CASP4P49662 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 AC006600.2-201ENST00000624834 2506 ntBASIC6.23□□□□□ -1.41
CASP4P49662 AC140479.2-201ENST00000421567 3130 ntBASIC6.23□□□□□ -1.41
CASP4P49662 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CASP4P49662 RNU1-136P-201ENST00000384181 164 ntBASIC6.23□□□□□ -1.41
CASP4P49662 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CASP4P49662 OR7E101P-201ENST00000400428 513 ntBASIC6.23□□□□□ -1.41
CASP4P49662 MIR1282-201ENST00000408865 101 ntBASIC6.23□□□□□ -1.41
CASP4P49662 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.23□□□□□ -1.41
CASP4P49662 HMGB3P24-201ENST00000433260 622 ntBASIC6.23□□□□□ -1.41
CASP4P49662 PCNPP2-201ENST00000441651 455 ntBASIC6.23□□□□□ -1.41
CASP4P49662 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 UBE2V2P4-201ENST00000447495 259 ntBASIC6.23□□□□□ -1.41
CASP4P49662 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.23□□□□□ -1.41
CASP4P49662 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.23□□□□□ -1.41
CASP4P49662 AC094085.1-201ENST00000468914 584 ntBASIC6.23□□□□□ -1.41
CASP4P49662 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.23□□□□□ -1.41
CASP4P49662 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 AC063977.5-201ENST00000601044 974 ntBASIC6.23□□□□□ -1.41
CASP4P49662 AC100767.2-201ENST00000604840 693 ntBASIC6.23□□□□□ -1.41
CASP4P49662 AL352984.2-201ENST00000611153 546 ntBASIC6.23□□□□□ -1.41
CASP4P49662 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CASP4P49662 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.23□□□□□ -1.41
CASP4P49662 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.23□□□□□ -1.41
CASP4P49662 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.23□□□□□ -1.41
CASP4P49662 AC068870.1-201ENST00000563737 2455 ntBASIC6.23□□□□□ -1.41
CASP4P49662 AL161912.4-201ENST00000623889 2468 ntBASIC6.23□□□□□ -1.41
CASP4P49662 MRE11P1-201ENST00000464884 2127 ntBASIC6.23□□□□□ -1.41
CASP4P49662 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CASP4P49662 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.23□□□□□ -1.41
CASP4P49662 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CASP4P49662 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.22□□□□□ -1.41
CASP4P49662 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CASP4P49662 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CASP4P49662 AC015799.1-201ENST00000622996 3122 ntBASIC6.22□□□□□ -1.41
CASP4P49662 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CASP4P49662 SNORA64.1-201ENST00000362600 132 ntBASIC6.22□□□□□ -1.41
CASP4P49662 AC087752.1-201ENST00000391360 558 ntBASIC6.22□□□□□ -1.41
CASP4P49662 SNORA11.5-201ENST00000408163 128 ntBASIC6.22□□□□□ -1.41
CASP4P49662 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.22□□□□□ -1.41
CASP4P49662 VN1R3-201ENST00000418822 919 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms