Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CX3CR1P49238 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CX3CR1P49238 AC109446.4-201ENST00000623235 2755 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CR1P49238 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CR1P49238 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CR1P49238 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CX3CR1P49238 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CX3CR1P49238 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CX3CR1P49238 MTHFD2P5-201ENST00000320415 844 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.12□□□□□ -1.59
CX3CR1P49238 RPL35AP3-201ENST00000414680 288 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.12□□□□□ -1.59
CX3CR1P49238 METTL15P3-201ENST00000415522 1221 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.12□□□□□ -1.59
CX3CR1P49238 AC023141.8-201ENST00000442554 208 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 RPL6P30-201ENST00000443382 862 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CR1P49238 AL161722.1-201ENST00000446972 1032 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AC097463.1-201ENST00000447288 481 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 RPL12P39-201ENST00000455456 496 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 RN7SL269P-201ENST00000467795 305 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CR1P49238 KATNBL1P4-201ENST00000503545 918 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AC111000.6-201ENST00000514471 709 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CR1P49238 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CR1P49238 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.12□□□□□ -1.59
CX3CR1P49238 MIR744-201ENST00000578242 98 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AC138207.8-204ENST00000579588 527 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 AL139099.4-201ENST00000614802 114 ntBASIC5.12□□□□□ -1.59
CX3CR1P49238 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CR1P49238 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CR1P49238 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CX3CR1P49238 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.12□□□□□ -1.59
CX3CR1P49238 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CX3CR1P49238 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.12□□□□□ -1.59
CX3CR1P49238 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 AP004607.3-201ENST00000530354 3915 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CX3CR1P49238 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 RNA5SP232-201ENST00000364144 119 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CR1P49238 KIF4CP-201ENST00000422742 1279 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 BX119904.3-201ENST00000428194 957 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC015983.1-201ENST00000441577 373 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC004129.2-201ENST00000457229 287 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 OR2A3P-201ENST00000493774 953 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 GLUD1P3-202ENST00000508551 200 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 RN7SKP35-201ENST00000517210 151 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CR1P49238 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CX3CR1P49238 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.11□□□□□ -1.59
CX3CR1P49238 ZNF322P1-201ENST00000568013 1209 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AC010547.7-201ENST00000570323 333 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.11□□□□□ -1.59
CX3CR1P49238 MIR4502-201ENST00000580432 81 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AP005119.1-201ENST00000580956 292 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 MIR5010-201ENST00000582846 120 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.11□□□□□ -1.59
CX3CR1P49238 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.11□□□□□ -1.59
CX3CR1P49238 AC111152.1-202ENST00000635848 339 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
CX3CR1P49238 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CX3CR1P49238 PARP4P2-201ENST00000446672 3326 ntBASIC5.11□□□□□ -1.59
CX3CR1P49238 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms