Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.13□□□□□ -1.43
HADHAP40939 RN7SKP166-201ENST00000410812 305 ntBASIC6.13□□□□□ -1.43
HADHAP40939 AL512504.1-201ENST00000415494 778 ntBASIC6.13□□□□□ -1.43
HADHAP40939 PTCD2P2-201ENST00000415579 1095 ntBASIC6.13□□□□□ -1.43
HADHAP40939 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.13□□□□□ -1.43
HADHAP40939 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.13□□□□□ -1.43
HADHAP40939 AC130360.1-201ENST00000425489 1117 ntBASIC6.13□□□□□ -1.43
HADHAP40939 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.13□□□□□ -1.43
HADHAP40939 AC010240.2-201ENST00000445363 1205 ntBASIC6.13□□□□□ -1.43
HADHAP40939 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.13□□□□□ -1.43
HADHAP40939 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.13□□□□□ -1.43
HADHAP40939 AL162739.1-201ENST00000450606 307 ntBASIC6.13□□□□□ -1.43
HADHAP40939 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.13□□□□□ -1.43
HADHAP40939 AC104339.1-201ENST00000465478 348 ntBASIC6.13□□□□□ -1.43
HADHAP40939 AC022336.1-201ENST00000475510 337 ntBASIC6.13□□□□□ -1.43
HADHAP40939 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 ASNSP4-201ENST00000511103 447 ntBASIC6.13□□□□□ -1.43
HADHAP40939 RNA5SP434-201ENST00000516647 121 ntBASIC6.13□□□□□ -1.43
HADHAP40939 RNA5SP441-201ENST00000516809 88 ntBASIC6.13□□□□□ -1.43
HADHAP40939 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.13□□□□□ -1.43
HADHAP40939 AC130365.2-201ENST00000525882 1201 ntBASIC6.13□□□□□ -1.43
HADHAP40939 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 AC084121.1-201ENST00000533882 835 ntBASIC6.13□□□□□ -1.43
HADHAP40939 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.13□□□□□ -1.43
HADHAP40939 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.13□□□□□ -1.43
HADHAP40939 AL845552.1-201ENST00000556820 323 ntBASIC6.13□□□□□ -1.43
HADHAP40939 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.13□□□□□ -1.43
HADHAP40939 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.13□□□□□ -1.43
HADHAP40939 MIR4310-201ENST00000582950 57 ntBASIC6.13□□□□□ -1.43
HADHAP40939 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.13□□□□□ -1.43
HADHAP40939 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.13□□□□□ -1.43
HADHAP40939 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.13□□□□□ -1.43
HADHAP40939 AL080312.2-201ENST00000613001 630 ntBASIC6.13□□□□□ -1.43
HADHAP40939 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.13□□□□□ -1.43
HADHAP40939 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.13□□□□□ -1.43
HADHAP40939 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.13□□□□□ -1.43
HADHAP40939 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HADHAP40939 AC022164.1-201ENST00000568767 2673 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.12□□□□□ -1.43
HADHAP40939 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HADHAP40939 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HADHAP40939 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.12□□□□□ -1.43
HADHAP40939 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 YWHAZP6-201ENST00000399764 738 ntBASIC6.12□□□□□ -1.43
HADHAP40939 SEPT7P8-201ENST00000413308 775 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 AC108479.1-201ENST00000431142 427 ntBASIC6.12□□□□□ -1.43
HADHAP40939 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 EIF3EP1-201ENST00000433978 1316 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.12□□□□□ -1.43
HADHAP40939 RPL5P10-201ENST00000445207 894 ntBASIC6.12□□□□□ -1.43
HADHAP40939 HMGB1P7-201ENST00000450921 612 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AC002553.3-201ENST00000453002 341 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.12□□□□□ -1.43
HADHAP40939 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.12□□□□□ -1.43
HADHAP40939 MAST4-IT1-201ENST00000514241 658 ntBASIC6.12□□□□□ -1.43
HADHAP40939 HSD3BP3-201ENST00000514706 994 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AP002981.1-201ENST00000517692 975 ntBASIC6.12□□□□□ -1.43
HADHAP40939 SEC11B-201ENST00000518383 499 ntBASIC6.12□□□□□ -1.43
HADHAP40939 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.12□□□□□ -1.43
HADHAP40939 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.12□□□□□ -1.43
HADHAP40939 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.12□□□□□ -1.43
HADHAP40939 NPM1P42-201ENST00000560329 862 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.12□□□□□ -1.43
HADHAP40939 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.12□□□□□ -1.43
HADHAP40939 LSM1P2-201ENST00000604911 322 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AC093388.1-201ENST00000609166 430 ntBASIC6.12□□□□□ -1.43
HADHAP40939 RN7SL261P-201ENST00000613441 282 ntBASIC6.12□□□□□ -1.43
HADHAP40939 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 AL357140.4-201ENST00000636827 412 ntBASIC6.12□□□□□ -1.43
HADHAP40939 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
HADHAP40939 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HADHAP40939 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HADHAP40939 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
HADHAP40939 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.11□□□□□ -1.43
HADHAP40939 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.11□□□□□ -1.43
HADHAP40939 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms