Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RPS4XP5-201ENST00000419038 768 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 AC016027.5-201ENST00000427227 210 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM23P36406 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM23P36406 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM23P36406 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM23P36406 AL162739.1-201ENST00000450606 307 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 AC108751.3-201ENST00000461814 1020 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 PPIAP19-201ENST00000486414 492 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 RN7SL57P-201ENST00000493687 290 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 GAPDHP71-201ENST00000511530 1003 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM23P36406 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM23P36406 AC008429.4-201ENST00000521201 182 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM23P36406 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM23P36406 AC079600.1-201ENST00000550326 297 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 AC091078.2-201ENST00000557145 559 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM23P36406 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM23P36406 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM23P36406 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM23P36406 AC008521.2-201ENST00000591021 259 ntBASIC5.87□□□□□ -1.47
TRIM23P36406 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM23P36406 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
TRIM23P36406 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM23P36406 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM23P36406 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM23P36406 THAP12P9-201ENST00000503971 2360 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM23P36406 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
TRIM23P36406 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM23P36406 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM23P36406 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM23P36406 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM23P36406 AL451046.1-201ENST00000406097 534 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 AC245060.4-201ENST00000413293 1121 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM23P36406 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM23P36406 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM23P36406 AL731534.1-201ENST00000434711 269 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM23P36406 CUBNP2-201ENST00000443534 1139 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 RPS17P15-201ENST00000475609 349 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 AC124945.1-201ENST00000485133 188 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 RPL7P51-201ENST00000490532 749 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 AL035690.1-201ENST00000490892 383 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM23P36406 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM23P36406 MTATP6P1-201ENST00000514057 681 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM23P36406 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM23P36406 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM23P36406 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM23P36406 TXNP4-201ENST00000575018 310 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM23P36406 AC002069.2-201ENST00000603580 883 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 PARP4P2-201ENST00000446672 3326 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM23P36406 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 AC092070.2-203ENST00000598377 3644 ntBASIC5.86□□□□□ -1.47
TRIM23P36406 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TRIM23P36406 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM23P36406 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM23P36406 ICE2P1-201ENST00000512800 1849 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 KARSP1-201ENST00000451871 1752 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 AC004656.1-201ENST00000568479 4951 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM23P36406 RNF19BPY-201ENST00000458209 1550 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 AL121768.1-201ENST00000613917 2544 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TRIM23P36406 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM23P36406 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM23P36406 AC106872.5-201ENST00000508856 1416 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 TET1P1-201ENST00000426627 2301 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 AC015799.1-201ENST00000622996 3122 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM23P36406 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM23P36406 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM23P36406 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TRIM23P36406 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM23P36406 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM23P36406 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM23P36406 AC092642.1-201ENST00000392417 425 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 AL360271.1-201ENST00000395679 510 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 AL445213.1-201ENST00000412589 747 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM23P36406 NAP1L4P2-201ENST00000425958 899 ntBASIC5.85□□□□□ -1.47
TRIM23P36406 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM23P36406 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM23P36406 RPL31P15-201ENST00000449770 338 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms