Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.5□□□□□ -1.37
BDNFP23560 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.5□□□□□ -1.37
BDNFP23560 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.5□□□□□ -1.37
BDNFP23560 EIF5AP4-201ENST00000441206 465 ntBASIC6.5□□□□□ -1.37
BDNFP23560 AL355355.1-201ENST00000442900 793 ntBASIC6.5□□□□□ -1.37
BDNFP23560 ZNF619P1-201ENST00000446539 752 ntBASIC6.5□□□□□ -1.37
BDNFP23560 LSM3P4-201ENST00000502948 309 ntBASIC6.5□□□□□ -1.37
BDNFP23560 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.5□□□□□ -1.37
BDNFP23560 RNA5SP340-201ENST00000517132 107 ntBASIC6.5□□□□□ -1.37
BDNFP23560 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.5□□□□□ -1.37
BDNFP23560 OR4A6P-201ENST00000534364 970 ntBASIC6.5□□□□□ -1.37
BDNFP23560 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.5□□□□□ -1.37
BDNFP23560 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.5□□□□□ -1.37
BDNFP23560 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.5□□□□□ -1.37
BDNFP23560 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.5□□□□□ -1.37
BDNFP23560 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.5□□□□□ -1.37
BDNFP23560 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BDNFP23560 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
BDNFP23560 AL137067.2-201ENST00000621202 131 ntBASIC6.5□□□□□ -1.37
BDNFP23560 AC073488.3-201ENST00000631611 778 ntBASIC6.5□□□□□ -1.37
BDNFP23560 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.5□□□□□ -1.37
BDNFP23560 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BDNFP23560 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.5□□□□□ -1.37
BDNFP23560 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
BDNFP23560 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BDNFP23560 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BDNFP23560 PSG10P-201ENST00000501199 1500 ntBASIC6.5□□□□□ -1.37
BDNFP23560 SAMMSON-213ENST00000641336 1521 ntBASIC6.5□□□□□ -1.37
BDNFP23560 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.5□□□□□ -1.37
BDNFP23560 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
BDNFP23560 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.49□□□□□ -1.37
BDNFP23560 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 AC019072.1-201ENST00000604535 1551 ntBASIC6.49□□□□□ -1.37
BDNFP23560 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 RBMY1HP-201ENST00000382759 1389 ntBASIC6.49□□□□□ -1.37
BDNFP23560 HDAC1P2-201ENST00000453661 1398 ntBASIC6.49□□□□□ -1.37
BDNFP23560 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 RNA5SP375-201ENST00000362975 119 ntBASIC6.49□□□□□ -1.37
BDNFP23560 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.49□□□□□ -1.37
BDNFP23560 LCN1P2-201ENST00000372030 223 ntBASIC6.49□□□□□ -1.37
BDNFP23560 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.49□□□□□ -1.37
BDNFP23560 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.49□□□□□ -1.37
BDNFP23560 AC244453.4-201ENST00000419150 388 ntBASIC6.49□□□□□ -1.37
BDNFP23560 NENFP1-201ENST00000419476 466 ntBASIC6.49□□□□□ -1.37
BDNFP23560 AC022022.1-201ENST00000430304 178 ntBASIC6.49□□□□□ -1.37
BDNFP23560 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 OR13K1P-201ENST00000444577 975 ntBASIC6.49□□□□□ -1.37
BDNFP23560 RPS27AP3-201ENST00000453803 454 ntBASIC6.49□□□□□ -1.37
BDNFP23560 RN7SL221P-201ENST00000466190 281 ntBASIC6.49□□□□□ -1.37
BDNFP23560 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
BDNFP23560 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.49□□□□□ -1.37
BDNFP23560 PRMT5P1-201ENST00000514351 598 ntBASIC6.49□□□□□ -1.37
BDNFP23560 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.49□□□□□ -1.37
BDNFP23560 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.49□□□□□ -1.37
BDNFP23560 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
BDNFP23560 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.49□□□□□ -1.37
BDNFP23560 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.49□□□□□ -1.37
BDNFP23560 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.49□□□□□ -1.37
BDNFP23560 RNU4ATAC-201ENST00000580972 127 ntBASIC6.49□□□□□ -1.37
BDNFP23560 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 MTCO2P22-201ENST00000603246 681 ntBASIC6.49□□□□□ -1.37
BDNFP23560 AL683813.2-201ENST00000605245 502 ntBASIC6.49□□□□□ -1.37
BDNFP23560 AC024589.2-201ENST00000605642 1294 ntBASIC6.49□□□□□ -1.37
BDNFP23560 AL121890.2-201ENST00000617644 465 ntBASIC6.49□□□□□ -1.37
BDNFP23560 MIR6861-201ENST00000618657 64 ntBASIC6.49□□□□□ -1.37
BDNFP23560 AP001005.3-201ENST00000622049 129 ntBASIC6.49□□□□□ -1.37
BDNFP23560 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BDNFP23560 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
BDNFP23560 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.49□□□□□ -1.37
BDNFP23560 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
BDNFP23560 AC110373.1-201ENST00000505994 3505 ntBASIC6.49□□□□□ -1.37
BDNFP23560 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.48□□□□□ -1.37
BDNFP23560 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BDNFP23560 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
BDNFP23560 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms