Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RPL23AP28-201ENST00000448062 470 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 RN7SL502P-201ENST00000481857 290 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 RN7SL37P-201ENST00000490461 307 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 FTH1P8-201ENST00000498161 514 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC096571.1-202ENST00000506634 735 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AL390198.2-201ENST00000510553 222 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC113191.1-201ENST00000517759 403 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC084337.1-201ENST00000524809 686 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.74□□□□□ -1.49
TNFSF4P23510 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC140063.1-201ENST00000541343 259 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.74□□□□□ -1.49
TNFSF4P23510 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFSF4P23510 NPM1P47-201ENST00000560843 856 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC018552.1-201ENST00000562099 811 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AC095057.3-201ENST00000567102 1157 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 ANP32BP1-202ENST00000568553 737 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.74□□□□□ -1.49
TNFSF4P23510 RN7SL32P-201ENST00000580514 281 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
TNFSF4P23510 ZNF92P3-201ENST00000596594 954 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AC036176.3-201ENST00000602456 418 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 RPS4XP21-201ENST00000603814 750 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 Z82195.1-201ENST00000604558 398 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AL137000.1-201ENST00000610528 1244 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 CYCSP41-201ENST00000616920 296 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 CLUHP10-201ENST00000631979 980 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFSF4P23510 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC093775.1-201ENST00000624154 1868 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFSF4P23510 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFSF4P23510 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TNFSF4P23510 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TNFSF4P23510 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFSF4P23510 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AL137100.1-201ENST00000556703 1620 ntBASIC5.74□□□□□ -1.49
TNFSF4P23510 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TNFSF4P23510 AL596244.1-201ENST00000567068 3779 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFSF4P23510 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TNFSF4P23510 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TNFSF4P23510 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.73□□□□□ -1.49
TNFSF4P23510 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.73□□□□□ -1.49
TNFSF4P23510 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.73□□□□□ -1.49
TNFSF4P23510 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFSF4P23510 SNORA38B-201ENST00000363524 131 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 RNU6-236P-201ENST00000363886 106 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 RN7SKP118-201ENST00000364331 330 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TNFSF4P23510 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TNFSF4P23510 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 MIR1266-201ENST00000408125 84 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.73□□□□□ -1.49
TNFSF4P23510 MTCO3P21-201ENST00000430791 643 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TNFSF4P23510 NPM1P23-201ENST00000440193 849 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 SOCS5P1-201ENST00000440415 949 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFSF4P23510 TRY2P-201ENST00000448860 689 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 OR51B8P-201ENST00000449892 769 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFSF4P23510 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.73□□□□□ -1.49
TNFSF4P23510 AP001372.4-201ENST00000524889 472 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 MORF4L1P3-201ENST00000525966 950 ntBASIC5.73□□□□□ -1.49
TNFSF4P23510 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms