Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC007225.2-201ENST00000562529 256 ntBASIC5.08□□□□□ -1.6
USF1P22415 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 AC020978.7-201ENST00000575953 1187 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 AL021368.3-201ENST00000607119 578 ntBASIC5.08□□□□□ -1.6
USF1P22415 AL136131.3-201ENST00000607600 188 ntBASIC5.08□□□□□ -1.6
USF1P22415 MIR6809-201ENST00000612189 116 ntBASIC5.08□□□□□ -1.6
USF1P22415 RN7SL787P-201ENST00000613000 284 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC004477.3-201ENST00000614061 590 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC010809.3-201ENST00000621310 641 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 OR8G3P-202ENST00000641572 1255 ntBASIC5.08□□□□□ -1.6
USF1P22415 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
USF1P22415 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.08□□□□□ -1.6
USF1P22415 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 AL022311.1-201ENST00000623726 19416 ntBASIC5.07□□□□□ -1.6
USF1P22415 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 AL161912.4-201ENST00000623889 2468 ntBASIC5.07□□□□□ -1.6
USF1P22415 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 AC027088.4-201ENST00000611559 1947 ntBASIC5.07□□□□□ -1.6
USF1P22415 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USF1P22415 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.07□□□□□ -1.6
USF1P22415 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 MIR143-201ENST00000385300 106 ntBASIC5.07□□□□□ -1.6
USF1P22415 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
USF1P22415 RN7SKP293-201ENST00000411389 296 ntBASIC5.07□□□□□ -1.6
USF1P22415 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.07□□□□□ -1.6
USF1P22415 AL513325.1-201ENST00000417716 1034 ntBASIC5.07□□□□□ -1.6
USF1P22415 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.07□□□□□ -1.6
USF1P22415 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 BX119321.1-201ENST00000428912 797 ntBASIC5.07□□□□□ -1.6
USF1P22415 AL121776.1-201ENST00000429337 372 ntBASIC5.07□□□□□ -1.6
USF1P22415 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USF1P22415 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.07□□□□□ -1.6
USF1P22415 AL022319.1-201ENST00000458183 1167 ntBASIC5.07□□□□□ -1.6
USF1P22415 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.07□□□□□ -1.6
USF1P22415 RPSAP39-201ENST00000467439 883 ntBASIC5.07□□□□□ -1.6
USF1P22415 UBFD1P1-201ENST00000473259 814 ntBASIC5.07□□□□□ -1.6
USF1P22415 AOX3P-204ENST00000491025 2107 ntBASIC5.07□□□□□ -1.6
USF1P22415 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.07□□□□□ -1.6
USF1P22415 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.07□□□□□ -1.6
USF1P22415 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.07□□□□□ -1.6
USF1P22415 PCNAP4-201ENST00000532690 730 ntBASIC5.07□□□□□ -1.6
USF1P22415 RPA2P3-201ENST00000533268 770 ntBASIC5.07□□□□□ -1.6
USF1P22415 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 AC007494.1-201ENST00000562293 760 ntBASIC5.07□□□□□ -1.6
USF1P22415 AC007066.2-202ENST00000566531 914 ntBASIC5.07□□□□□ -1.6
USF1P22415 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 AC012254.3-201ENST00000591183 2117 ntBASIC5.07□□□□□ -1.6
USF1P22415 AC107993.1-201ENST00000591343 684 ntBASIC5.07□□□□□ -1.6
USF1P22415 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 AC132825.8-201ENST00000640783 297 ntBASIC5.07□□□□□ -1.6
USF1P22415 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USF1P22415 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.07□□□□□ -1.6
USF1P22415 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
USF1P22415 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USF1P22415 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 AL137141.1-201ENST00000624622 4836 ntBASIC5.06□□□□□ -1.6
USF1P22415 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.06□□□□□ -1.6
USF1P22415 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.06□□□□□ -1.6
USF1P22415 AC007562.1-201ENST00000421819 517 ntBASIC5.06□□□□□ -1.6
USF1P22415 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.06□□□□□ -1.6
USF1P22415 AL512637.1-201ENST00000439523 1231 ntBASIC5.06□□□□□ -1.6
USF1P22415 AC023274.2-201ENST00000445264 521 ntBASIC5.06□□□□□ -1.6
USF1P22415 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.06□□□□□ -1.6
USF1P22415 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.06□□□□□ -1.6
USF1P22415 NPM1P19-201ENST00000450070 712 ntBASIC5.06□□□□□ -1.6
USF1P22415 AC016027.4-201ENST00000450866 277 ntBASIC5.06□□□□□ -1.6
USF1P22415 RPS27AP2-201ENST00000457576 465 ntBASIC5.06□□□□□ -1.6
USF1P22415 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.06□□□□□ -1.6
USF1P22415 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USF1P22415 CYCSP22-201ENST00000517555 339 ntBASIC5.06□□□□□ -1.6
USF1P22415 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms