Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC073594.1-201ENST00000462065 364 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AC094085.1-201ENST00000468914 584 ntBASIC5.9□□□□□ -1.46
CDH3P22223 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 AP000926.3-201ENST00000497201 299 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH3P22223 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH3P22223 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.9□□□□□ -1.46
CDH3P22223 AC136777.2-201ENST00000522979 358 ntBASIC5.9□□□□□ -1.46
CDH3P22223 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH3P22223 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH3P22223 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.9□□□□□ -1.46
CDH3P22223 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.9□□□□□ -1.46
CDH3P22223 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.9□□□□□ -1.46
CDH3P22223 AC068768.2-201ENST00000602352 343 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AC025857.2-201ENST00000602711 238 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH3P22223 AC024589.2-201ENST00000605642 1294 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AL645933.2-201ENST00000606743 1207 ntBASIC5.9□□□□□ -1.46
CDH3P22223 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.9□□□□□ -1.46
CDH3P22223 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH3P22223 AC107308.1-201ENST00000615897 301 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AC245014.3-201ENST00000618589 347 ntBASIC5.9□□□□□ -1.46
CDH3P22223 AL137067.2-201ENST00000621202 131 ntBASIC5.9□□□□□ -1.46
CDH3P22223 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH3P22223 AC073488.3-201ENST00000631611 778 ntBASIC5.9□□□□□ -1.46
CDH3P22223 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CDH3P22223 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH3P22223 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH3P22223 AC008627.1-201ENST00000517511 1704 ntBASIC5.9□□□□□ -1.47
CDH3P22223 AL137141.1-201ENST00000624622 4836 ntBASIC5.9□□□□□ -1.47
CDH3P22223 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH3P22223 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.9□□□□□ -1.47
CDH3P22223 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDH3P22223 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 AL359091.1-201ENST00000449048 1734 ntBASIC5.89□□□□□ -1.47
CDH3P22223 AL359955.1-201ENST00000455242 3275 ntBASIC5.89□□□□□ -1.47
CDH3P22223 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDH3P22223 AC240504.1-201ENST00000395709 845 ntBASIC5.89□□□□□ -1.47
CDH3P22223 AC245096.1-201ENST00000413104 546 ntBASIC5.89□□□□□ -1.47
CDH3P22223 RPL12P12-201ENST00000424633 501 ntBASIC5.89□□□□□ -1.47
CDH3P22223 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH3P22223 RPL12P11-201ENST00000439970 501 ntBASIC5.89□□□□□ -1.47
CDH3P22223 ZNF619P1-201ENST00000446539 752 ntBASIC5.89□□□□□ -1.47
CDH3P22223 FTLP8-201ENST00000446770 267 ntBASIC5.89□□□□□ -1.47
CDH3P22223 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH3P22223 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH3P22223 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH3P22223 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 RNA5SP434-201ENST00000516647 121 ntBASIC5.89□□□□□ -1.47
CDH3P22223 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH3P22223 AC007956.1-201ENST00000555623 542 ntBASIC5.89□□□□□ -1.47
CDH3P22223 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 MIR3189-201ENST00000578735 73 ntBASIC5.89□□□□□ -1.47
CDH3P22223 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH3P22223 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 AP001962.1-201ENST00000624114 559 ntBASIC5.89□□□□□ -1.47
CDH3P22223 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.89□□□□□ -1.47
CDH3P22223 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 KYNUP3-201ENST00000574386 1341 ntBASIC5.89□□□□□ -1.47
CDH3P22223 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 RBMY1HP-201ENST00000382759 1389 ntBASIC5.89□□□□□ -1.47
CDH3P22223 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH3P22223 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH3P22223 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH3P22223 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.88□□□□□ -1.47
CDH3P22223 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
CDH3P22223 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH3P22223 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CDH3P22223 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH3P22223 RN7SKP81-201ENST00000365603 331 ntBASIC5.88□□□□□ -1.47
CDH3P22223 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH3P22223 AL121835.1-201ENST00000404250 354 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms