Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SDC1P18827 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
SDC1P18827 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
SDC1P18827 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SDC1P18827 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.46□□□□□ -1.54
SDC1P18827 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.46□□□□□ -1.54
SDC1P18827 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.46□□□□□ -1.54
SDC1P18827 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 VN1R110P-201ENST00000438988 971 ntBASIC5.46□□□□□ -1.54
SDC1P18827 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SDC1P18827 RPS23P2-201ENST00000463671 415 ntBASIC5.46□□□□□ -1.54
SDC1P18827 AC104339.1-201ENST00000465478 348 ntBASIC5.46□□□□□ -1.54
SDC1P18827 AL122020.1-201ENST00000472287 459 ntBASIC5.46□□□□□ -1.54
SDC1P18827 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 PCNAP4-201ENST00000532690 730 ntBASIC5.46□□□□□ -1.54
SDC1P18827 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 AL356801.1-201ENST00000559320 294 ntBASIC5.46□□□□□ -1.54
SDC1P18827 AC093524.1-201ENST00000564266 1094 ntBASIC5.46□□□□□ -1.54
SDC1P18827 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.46□□□□□ -1.54
SDC1P18827 DHFRP1-201ENST00000579682 559 ntBASIC5.46□□□□□ -1.54
SDC1P18827 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.46□□□□□ -1.54
SDC1P18827 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.46□□□□□ -1.54
SDC1P18827 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SDC1P18827 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SDC1P18827 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SDC1P18827 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SDC1P18827 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SDC1P18827 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.46□□□□□ -1.54
SDC1P18827 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.46□□□□□ -1.54
SDC1P18827 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SDC1P18827 AC004656.1-201ENST00000568479 4951 ntBASIC5.46□□□□□ -1.54
SDC1P18827 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SDC1P18827 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SDC1P18827 BX284613.1-201ENST00000452221 1641 ntBASIC5.45□□□□□ -1.54
SDC1P18827 PDZK1P1-202ENST00000425209 1350 ntBASIC5.45□□□□□ -1.54
SDC1P18827 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SDC1P18827 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.45□□□□□ -1.54
SDC1P18827 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.45□□□□□ -1.54
SDC1P18827 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SDC1P18827 RNA5SP326-201ENST00000363209 110 ntBASIC5.45□□□□□ -1.54
SDC1P18827 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SDC1P18827 AC096921.1-201ENST00000411661 375 ntBASIC5.45□□□□□ -1.54
SDC1P18827 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.45□□□□□ -1.54
SDC1P18827 MRPL53P1-201ENST00000414323 319 ntBASIC5.45□□□□□ -1.54
SDC1P18827 NIFKP3-201ENST00000417799 865 ntBASIC5.45□□□□□ -1.54
SDC1P18827 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.45□□□□□ -1.54
SDC1P18827 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.45□□□□□ -1.54
SDC1P18827 EEF1B2P3-201ENST00000447718 678 ntBASIC5.45□□□□□ -1.54
SDC1P18827 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.45□□□□□ -1.54
SDC1P18827 AC068228.1-201ENST00000461723 211 ntBASIC5.45□□□□□ -1.54
SDC1P18827 RPS17P5-201ENST00000498293 408 ntBASIC5.45□□□□□ -1.54
SDC1P18827 AC092349.1-201ENST00000504903 310 ntBASIC5.45□□□□□ -1.54
SDC1P18827 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.45□□□□□ -1.54
SDC1P18827 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.45□□□□□ -1.54
SDC1P18827 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.45□□□□□ -1.54
SDC1P18827 AL845552.1-201ENST00000556820 323 ntBASIC5.45□□□□□ -1.54
SDC1P18827 CYCSP38-201ENST00000559840 322 ntBASIC5.45□□□□□ -1.54
SDC1P18827 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.45□□□□□ -1.54
SDC1P18827 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.45□□□□□ -1.54
SDC1P18827 AL583832.1-201ENST00000603227 784 ntBASIC5.45□□□□□ -1.54
SDC1P18827 AL357153.4-201ENST00000620487 1016 ntBASIC5.45□□□□□ -1.54
SDC1P18827 AC022919.1-201ENST00000624979 626 ntBASIC5.45□□□□□ -1.54
SDC1P18827 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.45□□□□□ -1.54
SDC1P18827 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SDC1P18827 AC006600.2-201ENST00000624834 2506 ntBASIC5.45□□□□□ -1.54
SDC1P18827 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SDC1P18827 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SDC1P18827 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SDC1P18827 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SDC1P18827 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SDC1P18827 AC092451.3-201ENST00000625067 1343 ntBASIC5.45□□□□□ -1.54
SDC1P18827 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SDC1P18827 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SDC1P18827 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.44□□□□□ -1.54
SDC1P18827 AC139426.3-201ENST00000605648 2059 ntBASIC5.44□□□□□ -1.54
SDC1P18827 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SDC1P18827 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.44□□□□□ -1.54
SDC1P18827 SAMM50P1-201ENST00000455403 1399 ntBASIC5.44□□□□□ -1.54
SDC1P18827 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.44□□□□□ -1.54
SDC1P18827 HSPD1P7-201ENST00000447985 1686 ntBASIC5.44□□□□□ -1.54
SDC1P18827 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SDC1P18827 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.44□□□□□ -1.54
SDC1P18827 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SDC1P18827 AC104964.3-201ENST00000606115 2860 ntBASIC5.44□□□□□ -1.54
SDC1P18827 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
SDC1P18827 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SDC1P18827 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.44□□□□□ -1.54
SDC1P18827 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.44□□□□□ -1.54
SDC1P18827 AC005042.1-201ENST00000393397 800 ntBASIC5.44□□□□□ -1.54
SDC1P18827 AL355994.1-201ENST00000424379 260 ntBASIC5.44□□□□□ -1.54
SDC1P18827 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SDC1P18827 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.44□□□□□ -1.54
SDC1P18827 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.44□□□□□ -1.54
SDC1P18827 MED28P3-201ENST00000444288 531 ntBASIC5.44□□□□□ -1.54
SDC1P18827 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.44□□□□□ -1.54
SDC1P18827 AC093166.3-201ENST00000448785 303 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms