Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.21□□□□□ -1.57
FREM3P0C091 AC013244.1-201ENST00000604279 193 ntBASIC5.21□□□□□ -1.57
FREM3P0C091 AC004477.3-201ENST00000614061 590 ntBASIC5.21□□□□□ -1.57
FREM3P0C091 TTC41P-205ENST00000551270 3963 ntBASIC5.21□□□□□ -1.57
FREM3P0C091 AC004014.2-201ENST00000623718 5122 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
FREM3P0C091 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
FREM3P0C091 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
FREM3P0C091 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.21□□□□□ -1.58
FREM3P0C091 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.21□□□□□ -1.58
FREM3P0C091 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
FREM3P0C091 AL353796.1-201ENST00000561542 3241 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 GNG5P2-201ENST00000372054 207 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
FREM3P0C091 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.21□□□□□ -1.58
FREM3P0C091 DEFA9P-201ENST00000433042 285 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 USP24P1-201ENST00000433802 779 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 snoU13.29-201ENST00000459370 104 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 AC087672.1-201ENST00000479876 766 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.21□□□□□ -1.58
FREM3P0C091 AC139365.2-201ENST00000517972 253 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.21□□□□□ -1.58
FREM3P0C091 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.21□□□□□ -1.58
FREM3P0C091 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.21□□□□□ -1.58
FREM3P0C091 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.21□□□□□ -1.58
FREM3P0C091 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.21□□□□□ -1.58
FREM3P0C091 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
FREM3P0C091 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.21□□□□□ -1.58
FREM3P0C091 MAPK10-270ENST00000641102 3538 ntBASIC5.21□□□□□ -1.58
FREM3P0C091 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.21□□□□□ -1.58
FREM3P0C091 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 RN7SKP69-201ENST00000365390 305 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 OR3A2-201ENST00000408891 1076 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 SDHDP6-201ENST00000414693 480 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.2□□□□□ -1.58
FREM3P0C091 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 AC073410.1-201ENST00000435125 589 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 SUMO2P19-201ENST00000518920 295 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 AC087516.1-201ENST00000561236 2428 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.2□□□□□ -1.58
FREM3P0C091 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.2□□□□□ -1.58
FREM3P0C091 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.2□□□□□ -1.58
FREM3P0C091 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.2□□□□□ -1.58
FREM3P0C091 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
FREM3P0C091 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 AC007159.1-201ENST00000566529 4706 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
FREM3P0C091 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 AL121886.1-201ENST00000358609 435 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 RNA5SP284-201ENST00000384547 118 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 RNA5SP178-201ENST00000410380 128 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.2□□□□□ -1.58
FREM3P0C091 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.2□□□□□ -1.58
FREM3P0C091 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FREM3P0C091 AC009120.1-201ENST00000493458 473 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC109481.1-201ENST00000509173 282 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC106872.4-201ENST00000510050 523 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.2□□□□□ -1.58
FREM3P0C091 AC021146.10-201ENST00000515628 706 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 SCARNA21.2-201ENST00000516600 166 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.2□□□□□ -1.58
FREM3P0C091 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FREM3P0C091 NPM1P42-201ENST00000560329 862 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 MIR4505-201ENST00000582238 73 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.2□□□□□ -1.58
FREM3P0C091 OR7A1P-201ENST00000601206 970 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AC021422.1-201ENST00000621212 473 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 AL390318.1-201ENST00000624564 687 ntBASIC5.2□□□□□ -1.58
FREM3P0C091 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms