Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.88□□□□□ -1.63
CD74P04233 RPS7P6-201ENST00000485777 579 ntBASIC4.88□□□□□ -1.63
CD74P04233 RPL5P33-201ENST00000487833 905 ntBASIC4.88□□□□□ -1.63
CD74P04233 AC114324.2-202ENST00000503812 134 ntBASIC4.88□□□□□ -1.63
CD74P04233 AC092349.1-201ENST00000504903 310 ntBASIC4.88□□□□□ -1.63
CD74P04233 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.88□□□□□ -1.63
CD74P04233 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.88□□□□□ -1.63
CD74P04233 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.88□□□□□ -1.63
CD74P04233 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.88□□□□□ -1.63
CD74P04233 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.88□□□□□ -1.63
CD74P04233 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.88□□□□□ -1.63
CD74P04233 LSM3P2-201ENST00000551246 273 ntBASIC4.88□□□□□ -1.63
CD74P04233 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.88□□□□□ -1.63
CD74P04233 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.88□□□□□ -1.63
CD74P04233 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.88□□□□□ -1.63
CD74P04233 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.88□□□□□ -1.63
CD74P04233 MIR7853-201ENST00000584820 132 ntBASIC4.88□□□□□ -1.63
CD74P04233 AC008507.3-201ENST00000585753 472 ntBASIC4.88□□□□□ -1.63
CD74P04233 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.88□□□□□ -1.63
CD74P04233 FAM72A-208ENST00000607379 1139 ntBASIC4.88□□□□□ -1.63
CD74P04233 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.88□□□□□ -1.63
CD74P04233 MIR6849-201ENST00000618543 69 ntBASIC4.88□□□□□ -1.63
CD74P04233 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.88□□□□□ -1.63
CD74P04233 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.88□□□□□ -1.63
CD74P04233 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 AC004023.1-201ENST00000561473 1744 ntBASIC4.88□□□□□ -1.63
CD74P04233 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 AC006484.1-201ENST00000435086 1884 ntBASIC4.88□□□□□ -1.63
CD74P04233 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.88□□□□□ -1.63
CD74P04233 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 BRAFP1-201ENST00000445336 2703 ntBASIC4.88□□□□□ -1.63
CD74P04233 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD74P04233 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.87□□□□□ -1.63
CD74P04233 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.87□□□□□ -1.63
CD74P04233 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 AC092681.1-201ENST00000297369 291 ntBASIC4.87□□□□□ -1.63
CD74P04233 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CD74P04233 MTHFD2P5-201ENST00000320415 844 ntBASIC4.87□□□□□ -1.63
CD74P04233 U3.28-201ENST00000391249 210 ntBASIC4.87□□□□□ -1.63
CD74P04233 RN7SKP205-201ENST00000410999 307 ntBASIC4.87□□□□□ -1.63
CD74P04233 AC096921.1-201ENST00000411661 375 ntBASIC4.87□□□□□ -1.63
CD74P04233 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.87□□□□□ -1.63
CD74P04233 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 MTND2P12-201ENST00000417560 1252 ntBASIC4.87□□□□□ -1.63
CD74P04233 AL360013.1-201ENST00000419031 858 ntBASIC4.87□□□□□ -1.63
CD74P04233 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.87□□□□□ -1.63
CD74P04233 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 AP003385.1-201ENST00000426387 893 ntBASIC4.87□□□□□ -1.63
CD74P04233 RPSAP65-201ENST00000429660 595 ntBASIC4.87□□□□□ -1.63
CD74P04233 RPL12P18-201ENST00000437175 325 ntBASIC4.87□□□□□ -1.63
CD74P04233 SEPT14P12-201ENST00000442280 560 ntBASIC4.87□□□□□ -1.63
CD74P04233 AC010240.2-201ENST00000445363 1205 ntBASIC4.87□□□□□ -1.63
CD74P04233 RPS18P1-201ENST00000447840 458 ntBASIC4.87□□□□□ -1.63
CD74P04233 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 AC005165.2-201ENST00000466070 380 ntBASIC4.87□□□□□ -1.63
CD74P04233 RPL12P24-201ENST00000474907 486 ntBASIC4.87□□□□□ -1.63
CD74P04233 OR7E22P-201ENST00000478335 1035 ntBASIC4.87□□□□□ -1.63
CD74P04233 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 AC095052.1-201ENST00000509955 863 ntBASIC4.87□□□□□ -1.63
CD74P04233 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CD74P04233 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.87□□□□□ -1.63
CD74P04233 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CD74P04233 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CD74P04233 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.87□□□□□ -1.63
CD74P04233 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 AC117409.1-201ENST00000470499 1310 ntBASIC4.87□□□□□ -1.63
CD74P04233 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.87□□□□□ -1.63
CD74P04233 AL162456.1-201ENST00000634535 2006 ntBASIC4.87□□□□□ -1.63
CD74P04233 AP004607.3-201ENST00000530354 3915 ntBASIC4.87□□□□□ -1.63
CD74P04233 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD74P04233 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.87□□□□□ -1.63
CD74P04233 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD74P04233 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CD74P04233 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms