Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TNFP01375 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TNFP01375 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 RNA5SP132-201ENST00000364725 118 ntBASIC5.64□□□□□ -1.51
TNFP01375 RN7SKP124-201ENST00000364730 341 ntBASIC5.64□□□□□ -1.51
TNFP01375 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.64□□□□□ -1.51
TNFP01375 AL596448.1-201ENST00000415024 392 ntBASIC5.64□□□□□ -1.51
TNFP01375 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 MARK2P12-201ENST00000420129 585 ntBASIC5.64□□□□□ -1.51
TNFP01375 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 AL365220.1-201ENST00000432923 399 ntBASIC5.64□□□□□ -1.51
TNFP01375 OR7E116P-201ENST00000448529 957 ntBASIC5.64□□□□□ -1.51
TNFP01375 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFP01375 RN7SL72P-201ENST00000460697 269 ntBASIC5.64□□□□□ -1.51
TNFP01375 AC115223.1-201ENST00000466377 870 ntBASIC5.64□□□□□ -1.51
TNFP01375 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.64□□□□□ -1.51
TNFP01375 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.64□□□□□ -1.51
TNFP01375 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFP01375 AC090424.1-201ENST00000535243 736 ntBASIC5.64□□□□□ -1.51
TNFP01375 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFP01375 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.64□□□□□ -1.51
TNFP01375 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TNFP01375 MIR3176-201ENST00000582210 90 ntBASIC5.64□□□□□ -1.51
TNFP01375 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 FBXL21-201ENST00000297158 1305 ntBASIC5.64□□□□□ -1.51
TNFP01375 SRRM1P3-201ENST00000426911 2678 ntBASIC5.64□□□□□ -1.51
TNFP01375 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.64□□□□□ -1.51
TNFP01375 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFP01375 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TNFP01375 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.64□□□□□ -1.51
TNFP01375 MAPK10-270ENST00000641102 3538 ntBASIC5.64□□□□□ -1.51
TNFP01375 AC007842.1-201ENST00000597336 2039 ntBASIC5.64□□□□□ -1.51
TNFP01375 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 MRE11P1-201ENST00000464884 2127 ntBASIC5.63□□□□□ -1.51
TNFP01375 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 AP000641.1-201ENST00000531988 1639 ntBASIC5.63□□□□□ -1.51
TNFP01375 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 RN7SKP160-201ENST00000363804 340 ntBASIC5.63□□□□□ -1.51
TNFP01375 AL391361.1-201ENST00000405580 489 ntBASIC5.63□□□□□ -1.51
TNFP01375 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
TNFP01375 NIFKP3-201ENST00000417799 865 ntBASIC5.63□□□□□ -1.51
TNFP01375 FMO7P-201ENST00000436045 768 ntBASIC5.63□□□□□ -1.51
TNFP01375 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFP01375 LDHBP2-201ENST00000456969 1005 ntBASIC5.63□□□□□ -1.51
TNFP01375 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFP01375 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.63□□□□□ -1.51
TNFP01375 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 RPS23P2-201ENST00000463671 415 ntBASIC5.63□□□□□ -1.51
TNFP01375 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.63□□□□□ -1.51
TNFP01375 AC006539.1-201ENST00000481419 501 ntBASIC5.63□□□□□ -1.51
TNFP01375 RPS3AP15-201ENST00000483874 781 ntBASIC5.63□□□□□ -1.51
TNFP01375 RN7SL284P-201ENST00000498823 275 ntBASIC5.63□□□□□ -1.51
TNFP01375 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.63□□□□□ -1.51
TNFP01375 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 MIR1273E-201ENST00000581165 102 ntBASIC5.63□□□□□ -1.51
TNFP01375 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.63□□□□□ -1.51
TNFP01375 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TNFP01375 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.63□□□□□ -1.51
TNFP01375 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
TNFP01375 LINC02019-201ENST00000608605 2060 ntBASIC5.63□□□□□ -1.51
TNFP01375 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
TNFP01375 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TNFP01375 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
TNFP01375 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFP01375 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TNFP01375 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFP01375 RNA5SP131-201ENST00000365452 119 ntBASIC5.62□□□□□ -1.51
TNFP01375 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFP01375 GTF3AP1-201ENST00000416942 1004 ntBASIC5.62□□□□□ -1.51
TNFP01375 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.62□□□□□ -1.51
TNFP01375 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.62□□□□□ -1.51
TNFP01375 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.62□□□□□ -1.51
TNFP01375 GAPDHP48-201ENST00000436626 961 ntBASIC5.62□□□□□ -1.51
TNFP01375 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.62□□□□□ -1.51
TNFP01375 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFP01375 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.62□□□□□ -1.51
TNFP01375 AC105384.2-201ENST00000508433 640 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms