Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNU4ATAC-201ENST00000580972 127 ntBASIC5.55□□□□□ -1.52
HCN1O60741 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.55□□□□□ -1.52
HCN1O60741 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN1O60741 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN1O60741 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
HCN1O60741 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.55□□□□□ -1.52
HCN1O60741 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN1O60741 AC141002.1-201ENST00000607025 279 ntBASIC5.55□□□□□ -1.52
HCN1O60741 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.55□□□□□ -1.52
HCN1O60741 FO681491.1-202ENST00000623392 737 ntBASIC5.55□□□□□ -1.52
HCN1O60741 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
HCN1O60741 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN1O60741 MAPK10-350ENST00000641777 965 ntBASIC5.55□□□□□ -1.52
HCN1O60741 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HCN1O60741 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HCN1O60741 AC016583.1-201ENST00000624221 2431 ntBASIC5.55□□□□□ -1.52
HCN1O60741 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
HCN1O60741 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HCN1O60741 AC022325.1-201ENST00000502748 2199 ntBASIC5.55□□□□□ -1.52
HCN1O60741 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HCN1O60741 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HCN1O60741 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCN1O60741 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
HCN1O60741 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HCN1O60741 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN1O60741 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN1O60741 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HCN1O60741 PTCD2P2-201ENST00000415579 1095 ntBASIC5.54□□□□□ -1.52
HCN1O60741 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.54□□□□□ -1.52
HCN1O60741 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 AC117434.1-201ENST00000419971 836 ntBASIC5.54□□□□□ -1.52
HCN1O60741 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 AC066692.1-201ENST00000421721 457 ntBASIC5.54□□□□□ -1.52
HCN1O60741 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 FTLP8-201ENST00000446770 267 ntBASIC5.54□□□□□ -1.52
HCN1O60741 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 AC005077.1-201ENST00000449226 375 ntBASIC5.54□□□□□ -1.52
HCN1O60741 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 AC084754.1-201ENST00000463466 464 ntBASIC5.54□□□□□ -1.52
HCN1O60741 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCN1O60741 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
HCN1O60741 RPL23AP40-201ENST00000487630 390 ntBASIC5.54□□□□□ -1.52
HCN1O60741 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 SCARNA18.1-201ENST00000516330 83 ntBASIC5.54□□□□□ -1.52
HCN1O60741 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.54□□□□□ -1.52
HCN1O60741 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.54□□□□□ -1.52
HCN1O60741 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.54□□□□□ -1.52
HCN1O60741 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN1O60741 AL645933.2-201ENST00000606743 1207 ntBASIC5.54□□□□□ -1.52
HCN1O60741 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.54□□□□□ -1.52
HCN1O60741 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.54□□□□□ -1.52
HCN1O60741 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN1O60741 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN1O60741 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HCN1O60741 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN1O60741 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.54□□□□□ -1.52
HCN1O60741 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.54□□□□□ -1.52
HCN1O60741 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN1O60741 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.53□□□□□ -1.52
HCN1O60741 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HCN1O60741 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.53□□□□□ -1.52
HCN1O60741 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 RNA5SP435-201ENST00000364044 108 ntBASIC5.53□□□□□ -1.52
HCN1O60741 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HCN1O60741 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCN1O60741 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.53□□□□□ -1.52
HCN1O60741 RN7SKP166-201ENST00000410812 305 ntBASIC5.53□□□□□ -1.52
HCN1O60741 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.53□□□□□ -1.52
HCN1O60741 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.53□□□□□ -1.52
HCN1O60741 USP24P1-201ENST00000433802 779 ntBASIC5.53□□□□□ -1.52
HCN1O60741 TRBV5-2-201ENST00000489095 273 ntBASIC5.53□□□□□ -1.52
HCN1O60741 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.53□□□□□ -1.52
HCN1O60741 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.53□□□□□ -1.52
HCN1O60741 RNA5SP271-201ENST00000516700 88 ntBASIC5.53□□□□□ -1.52
HCN1O60741 RNA5SP340-201ENST00000517132 107 ntBASIC5.53□□□□□ -1.52
HCN1O60741 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.53□□□□□ -1.52
HCN1O60741 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.53□□□□□ -1.52
HCN1O60741 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms