Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 OR2L9P-201ENST00000444456 913 ntBASIC5.52□□□□□ -1.53
SSX4O60224 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX4O60224 AC090568.1-201ENST00000509499 856 ntBASIC5.52□□□□□ -1.53
SSX4O60224 COL6A4P2-205ENST00000509855 506 ntBASIC5.52□□□□□ -1.53
SSX4O60224 UGT2A3P7-201ENST00000510485 734 ntBASIC5.52□□□□□ -1.53
SSX4O60224 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 AL162632.2-201ENST00000553933 399 ntBASIC5.52□□□□□ -1.53
SSX4O60224 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 AC026898.1-201ENST00000586404 571 ntBASIC5.52□□□□□ -1.53
SSX4O60224 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 AC027334.1-201ENST00000603257 310 ntBASIC5.52□□□□□ -1.53
SSX4O60224 LSM1P2-201ENST00000604911 322 ntBASIC5.52□□□□□ -1.53
SSX4O60224 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.52□□□□□ -1.53
SSX4O60224 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 AC119674.1-220ENST00000641502 1048 ntBASIC5.52□□□□□ -1.53
SSX4O60224 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 AC004076.2-201ENST00000620532 3323 ntBASIC5.52□□□□□ -1.53
SSX4O60224 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSX4O60224 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX4O60224 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.52□□□□□ -1.53
SSX4O60224 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX4O60224 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX4O60224 AC005005.4-201ENST00000623789 16698 ntBASIC5.52□□□□□ -1.53
SSX4O60224 OR9K1P-202ENST00000641111 3217 ntBASIC5.52□□□□□ -1.53
SSX4O60224 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX4O60224 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SSX4O60224 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SSX4O60224 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 MIR365B-201ENST00000362317 111 ntBASIC5.51□□□□□ -1.53
SSX4O60224 RNA5SP453-201ENST00000362503 119 ntBASIC5.51□□□□□ -1.53
SSX4O60224 U3.10-201ENST00000364459 214 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AC092642.1-201ENST00000392417 425 ntBASIC5.51□□□□□ -1.53
SSX4O60224 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX4O60224 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 UBE2V1P14-201ENST00000415815 558 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AL359092.1-201ENST00000417156 265 ntBASIC5.51□□□□□ -1.53
SSX4O60224 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX4O60224 AL356806.1-201ENST00000422524 916 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX4O60224 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 AL445528.1-201ENST00000426330 420 ntBASIC5.51□□□□□ -1.53
SSX4O60224 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.51□□□□□ -1.53
SSX4O60224 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX4O60224 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX4O60224 AC018638.3-201ENST00000461273 132 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AC093719.1-201ENST00000480427 441 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AP002453.1-201ENST00000492327 668 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 HMGN1P17-201ENST00000513734 295 ntBASIC5.51□□□□□ -1.53
SSX4O60224 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SSX4O60224 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX4O60224 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 AC002519.2-203ENST00000567043 837 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX4O60224 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.51□□□□□ -1.53
SSX4O60224 AL138895.2-201ENST00000603019 178 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AC124916.2-201ENST00000604416 224 ntBASIC5.51□□□□□ -1.53
SSX4O60224 RPSAP75-201ENST00000605848 301 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AL023583.1-201ENST00000607518 1143 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AL136097.3-201ENST00000611097 505 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AC005277.2-201ENST00000617898 390 ntBASIC5.51□□□□□ -1.53
SSX4O60224 AL132640.3-201ENST00000630473 177 ntBASIC5.51□□□□□ -1.53
SSX4O60224 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX4O60224 AL357140.4-201ENST00000636827 412 ntBASIC5.51□□□□□ -1.53
SSX4O60224 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX4O60224 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SSX4O60224 NAMPTP1-201ENST00000440465 2514 ntBASIC5.51□□□□□ -1.53
SSX4O60224 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX4O60224 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms