Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AP001000.1-201ENST00000526843 742 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC092332.1-201ENST00000563684 829 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC068768.2-201ENST00000602352 343 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.62□□□□□ -1.51
SLC28A1O00337 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC015819.1-201ENST00000613588 663 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AC022400.9-201ENST00000623633 273 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AC005618.4-201ENST00000625053 554 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AP004607.3-201ENST00000530354 3915 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 MTCO1P22-201ENST00000604619 1360 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SLC28A1O00337 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 AL034417.1-201ENST00000399343 800 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AC016739.1-201ENST00000405359 345 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC28A1O00337 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SLC28A1O00337 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC28A1O00337 DEFA9P-201ENST00000433042 285 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 KF459542.1-201ENST00000450908 553 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC28A1O00337 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 AC117409.1-201ENST00000470499 1310 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC28A1O00337 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 AC099521.1-201ENST00000482557 334 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 RPL29P23-201ENST00000486188 442 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AC105384.2-201ENST00000508433 640 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC28A1O00337 PRMT5P1-201ENST00000514351 598 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 MRPS5P3-201ENST00000515577 166 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.61□□□□□ -1.51
SLC28A1O00337 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.61□□□□□ -1.51
SLC28A1O00337 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC28A1O00337 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 AC002519.2-203ENST00000567043 837 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 AC015712.7-201ENST00000615211 635 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 CR382285.2-201ENST00000624662 1495 ntBASIC5.61□□□□□ -1.51
SLC28A1O00337 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SLC28A1O00337 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SLC28A1O00337 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 CUL4AP1-201ENST00000514750 1863 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.6□□□□□ -1.51
SLC28A1O00337 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AC008627.1-201ENST00000517511 1704 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.6□□□□□ -1.51
SLC28A1O00337 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC28A1O00337 MTHFD2P5-201ENST00000320415 844 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SLC28A1O00337 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 RNU1-136P-201ENST00000384181 164 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SLC28A1O00337 TUBB4BP6-201ENST00000437576 479 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 RPL5P7-201ENST00000444235 813 ntBASIC5.6□□□□□ -1.51
SLC28A1O00337 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.6□□□□□ -1.51
SLC28A1O00337 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms