Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.67□□□□□ -1.5
PDLIM1O00151 AC023968.1-201ENST00000560719 475 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.67□□□□□ -1.5
PDLIM1O00151 AC012676.3-201ENST00000614983 479 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.67□□□□□ -1.5
PDLIM1O00151 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDLIM1O00151 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.67□□□□□ -1.5
PDLIM1O00151 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.67□□□□□ -1.5
PDLIM1O00151 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDLIM1O00151 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
PDLIM1O00151 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PDLIM1O00151 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 AC083843.3-201ENST00000623679 2186 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 RNA5SP485-201ENST00000365053 119 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 RNA5SP77-201ENST00000365394 120 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDLIM1O00151 HYALP1-201ENST00000417674 1279 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM1O00151 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.66□□□□□ -1.5
PDLIM1O00151 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM1O00151 OR2L9P-201ENST00000444456 913 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 GAPDHP23-201ENST00000444823 993 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC007383.1-201ENST00000445875 636 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 RPL29P23-201ENST00000486188 442 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC106822.1-201ENST00000502647 526 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.66□□□□□ -1.5
PDLIM1O00151 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.66□□□□□ -1.5
PDLIM1O00151 HMGN1P16-201ENST00000508308 283 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 RNA5SP418-201ENST00000515951 117 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.66□□□□□ -1.5
PDLIM1O00151 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 AC008055.1-201ENST00000547032 609 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC106730.2-201ENST00000566641 540 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PDLIM1O00151 AC010325.3-201ENST00000641084 394 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
PDLIM1O00151 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDLIM1O00151 AC073136.1-201ENST00000449426 2884 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PDLIM1O00151 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PDLIM1O00151 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 BTBD10P1-201ENST00000549824 1352 ntBASIC5.66□□□□□ -1.5
PDLIM1O00151 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.66□□□□□ -1.5
PDLIM1O00151 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM1O00151 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM1O00151 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM1O00151 ICE2P1-201ENST00000512800 1849 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM1O00151 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
PDLIM1O00151 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM1O00151 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
PDLIM1O00151 RN7SKP128-201ENST00000364270 303 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PDLIM1O00151 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC245096.1-201ENST00000413104 546 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 DHFRP2-201ENST00000414224 547 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM1O00151 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC108479.1-201ENST00000431142 427 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 CUBNP2-201ENST00000443534 1139 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 COX4I1P2-201ENST00000447446 547 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 AC097359.1-201ENST00000447946 463 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC005017.1-201ENST00000482002 490 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC093816.1-201ENST00000515076 913 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM1O00151 NPIPB14P-203ENST00000532298 987 ntBASIC5.65□□□□□ -1.5
PDLIM1O00151 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM1O00151 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.65□□□□□ -1.5
PDLIM1O00151 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM1O00151 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.65□□□□□ -1.5
PDLIM1O00151 DYNLL1P1-201ENST00000595442 269 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms