Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 KF459542.1-201ENST00000450908 553 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 RN7SL362P-201ENST00000494228 267 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AC009879.1-201ENST00000520029 839 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 IGLV3-30-201ENST00000524362 298 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 OR4A43P-201ENST00000532938 908 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AGGF1P7-201ENST00000562369 913 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AC096996.1-201ENST00000563813 325 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AC005244.1-201ENST00000582566 339 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 AL136131.3-201ENST00000607600 188 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 QRSL1P1-201ENST00000400977 1540 ntBASIC5.69□□□□□ -1.5
TRIM49D1C9J1S8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 MIR130B-202ENST00000385018 82 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC079809.1-201ENST00000415468 276 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 NIFKP3-201ENST00000417799 865 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 VTI1BP4-201ENST00000427516 527 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 HMGB1P7-201ENST00000450921 612 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC106822.1-201ENST00000502647 526 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC113367.2-201ENST00000505749 160 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AP001000.1-201ENST00000526843 742 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 BTG1P1-201ENST00000540396 508 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC122688.1-201ENST00000541494 223 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC027216.1-201ENST00000577726 685 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 MIR4776-2-201ENST00000580204 80 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 COX6CP7-201ENST00000597056 208 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AL139124.1-201ENST00000609123 421 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC016590.3-201ENST00000611171 753 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AL162574.1-201ENST00000615702 950 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AP005435.3-201ENST00000531260 3198 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 AC006206.1-201ENST00000544842 3387 ntBASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM49D1C9J1S8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 HSPD1P9-201ENST00000420325 1636 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RN7SKP69-201ENST00000365390 305 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 SNORA51.9-201ENST00000384295 124 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RN7SKP146-201ENST00000410242 334 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 NME1P1-201ENST00000420914 382 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 NDUFB4P8-201ENST00000435351 367 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 PCBP2P1-201ENST00000437262 977 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 RPL29P23-201ENST00000486188 442 ntBASIC5.67□□□□□ -1.5
TRIM49D1C9J1S8 EIF4E2P2-201ENST00000492033 736 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms