Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 RN7SKP15-201ENST00000364742 309 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL121977.1-201ENST00000401636 979 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 BX679664.2-201ENST00000439282 283 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 RPL12P11-201ENST00000439970 501 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC094085.1-201ENST00000468914 584 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 RN7SL193P-201ENST00000491708 276 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC025458.1-201ENST00000506046 166 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 GOLGA5P1-201ENST00000507317 980 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC093815.1-201ENST00000508637 280 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 NPM1P21-201ENST00000513394 762 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 MIR2117-201ENST00000516780 80 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 RNU6-943P-201ENST00000516960 98 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 TRIM77BP-201ENST00000524985 1119 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 OR4A42P-201ENST00000531397 938 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AP000619.2-201ENST00000546014 969 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 LINC00556-201ENST00000569603 412 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 GARSP1-201ENST00000570895 719 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 TXNP4-201ENST00000575018 310 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC108865.2-201ENST00000606881 432 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL136131.3-201ENST00000607600 188 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL445670.1-201ENST00000618889 801 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL353684.1-201ENST00000622677 1120 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC093909.5-201ENST00000621839 1799 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
ATG4BQ9Y4P1 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.59□□□□□ -1.52
ATG4BQ9Y4P1 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 RN7SKP128-201ENST00000364270 303 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 OSTCP1-201ENST00000455507 450 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 MTCO3P42-201ENST00000509488 518 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 MTCO3P39-201ENST00000514812 518 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC010547.7-201ENST00000570323 333 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 MIR4776-2-201ENST00000580204 80 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC145423.1-201ENST00000605712 336 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 MIR6793-201ENST00000612376 63 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AP005212.4-201ENST00000614206 710 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 PARP4P2-201ENST00000446672 3326 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 AC004656.1-201ENST00000568479 4951 ntBASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG4BQ9Y4P1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms