Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 RNA5SP308-201ENST00000362532 115 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC008173.1-201ENST00000418901 264 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 EIF4A1P1-201ENST00000420241 934 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 GLUD1P9-201ENST00000420997 1173 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AL589794.1-201ENST00000424971 390 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC084290.1-201ENST00000434995 374 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 GAPDHP33-201ENST00000443168 1013 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 MGAT2P1-201ENST00000449718 797 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 PPIAP32-201ENST00000449940 472 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC092691.2-201ENST00000461787 803 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 RPL6P9-201ENST00000466502 859 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 SUMO1P1-201ENST00000497904 306 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC021087.2-201ENST00000504656 1203 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC009094.1-201ENST00000564443 426 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC025283.1-201ENST00000572039 734 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 MIR4301-201ENST00000577203 66 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC010503.3-201ENST00000594355 540 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC036176.3-201ENST00000602456 418 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC005021.1-201ENST00000608730 355 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC093635.1-201ENST00000609028 555 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC245100.7-201ENST00000609678 442 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC092140.2-201ENST00000618027 521 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 AC027279.4-201ENST00000624371 2072 ntBASIC6.85□□□□□ -1.31
PPARGC1AQ9UBK2 HSPD1P11-201ENST00000508643 1702 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC007012.2-201ENST00000623206 1676 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 SNORD94-201ENST00000386037 137 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AL359092.1-201ENST00000417156 265 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AL929472.1-201ENST00000417484 429 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 VN1R108P-201ENST00000431580 830 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 MTCO3P5-201ENST00000433620 714 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC083906.1-201ENST00000509298 406 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 HPRT1P1-201ENST00000509498 657 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC124891.1-201ENST00000536322 519 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 CYB5AP5-201ENST00000549779 389 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 MTND4P33-201ENST00000556706 766 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 HMGN1P26-201ENST00000558737 303 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC021483.2-201ENST00000567415 758 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC109446.2-201ENST00000567872 497 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 MTCYBP33-201ENST00000575007 1130 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 MIR744-201ENST00000578242 98 ntBASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.84□□□□□ -1.31
PPARGC1AQ9UBK2 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms