Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.98□□□□□ -1.45
AMBRA1Q9C0C7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC027575.3-201ENST00000583058 2747 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 RPL5P20-201ENST00000403848 896 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL355615.1-201ENST00000406187 641 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC241520.1-201ENST00000422654 1099 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 MTCO2P20-201ENST00000437339 673 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC006994.1-201ENST00000438212 839 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL390879.1-201ENST00000439143 386 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 RAB28P3-201ENST00000448325 597 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 HMGB1P26-201ENST00000452520 628 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC105918.1-201ENST00000474399 838 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC022206.1-201ENST00000495947 347 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC008427.1-201ENST00000503102 655 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC005351.1-201ENST00000511152 786 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 SCARNA5-201ENST00000516201 276 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC004923.2-201ENST00000529649 369 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC090888.3-201ENST00000558917 509 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC023825.1-201ENST00000566704 1030 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 DHFRP1-201ENST00000579682 559 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 MIR4420-201ENST00000583944 77 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AL606834.3-201ENST00000602615 496 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 Z99289.3-201ENST00000605586 594 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 U1.41-201ENST00000617626 165 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 AC006963.1-201ENST00000624003 1052 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 FRG1DP-201ENST00000635586 771 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 SHQ1P1-201ENST00000437111 1544 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 CR788268.1-201ENST00000603931 1809 ntBASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
AMBRA1Q9C0C7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.96□□□□□ -1.45
AMBRA1Q9C0C7 AOX3P-204ENST00000491025 2107 ntBASIC5.96□□□□□ -1.45
AMBRA1Q9C0C7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
AMBRA1Q9C0C7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
AMBRA1Q9C0C7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.96□□□□□ -1.45
AMBRA1Q9C0C7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 ZNF29P-201ENST00000225587 168 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 GNG5P2-201ENST00000372054 207 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 RNU6-354P-201ENST00000383862 107 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 RNU6-610P-201ENST00000384264 107 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 AC019178.1-201ENST00000392337 440 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 MIR1282-201ENST00000408865 101 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 MRPS21P5-201ENST00000417885 231 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 AC007562.1-201ENST00000421819 517 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 MTCO1P51-201ENST00000427672 1060 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 GAPDHP19-201ENST00000431768 1005 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 AL035246.1-201ENST00000433554 1255 ntBASIC5.96□□□□□ -1.46
AMBRA1Q9C0C7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms