Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM4Q9C037 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM4Q9C037 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 AC093591.2-201ENST00000565254 3843 ntBASIC6.05□□□□□ -1.44
TRIM4Q9C037 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM4Q9C037 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TRIM4Q9C037 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AL353743.3-201ENST00000442109 1468 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AL096800.1-201ENST00000405326 893 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 RN7SKP216-201ENST00000411050 312 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AL121878.1-201ENST00000418638 859 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 CDY8P-201ENST00000428380 1279 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 CDY20P-201ENST00000447528 1279 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 VPS25P1-201ENST00000455691 508 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC022206.1-201ENST00000495947 347 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC025458.1-201ENST00000506046 166 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC091965.3-201ENST00000506236 208 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC131392.1-201ENST00000506490 633 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC090651.1-201ENST00000567865 634 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC090616.1-201ENST00000583895 447 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC004805.3-201ENST00000603178 310 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AL022394.1-201ENST00000606979 292 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC211433.2-201ENST00000608433 387 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AC241377.1-201ENST00000619797 406 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 RPL31P11-201ENST00000426558 1558 ntBASIC6.04□□□□□ -1.44
TRIM4Q9C037 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM4Q9C037 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
TRIM4Q9C037 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 MAPK10-328ENST00000641553 4009 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TRIM4Q9C037 RNA5SP443-201ENST00000363083 132 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 U3.25-201ENST00000391209 220 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 RPL6P30-201ENST00000443382 862 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 CXCR2P1-202ENST00000443392 1074 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC092967.1-201ENST00000449016 481 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC008410.1-201ENST00000483777 339 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC060775.1-201ENST00000518241 520 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC090286.3-201ENST00000573133 187 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC020978.7-201ENST00000575953 1187 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 OR7E18P-201ENST00000592589 702 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 AC073046.2-201ENST00000604756 527 ntBASIC6.03□□□□□ -1.44
TRIM4Q9C037 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms