Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC235565.1-201ENST00000456962 1325 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC112255.1-201ENST00000624070 2493 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 RNA5SP375-201ENST00000362975 119 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 NPM1P38-201ENST00000403835 865 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AK4P4-201ENST00000419465 646 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AL662874.1-201ENST00000426065 230 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 RAB28P3-201ENST00000448325 597 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 RPS27AP3-201ENST00000453803 454 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC006539.1-201ENST00000481419 501 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC083795.1-201ENST00000491760 320 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC108693.1-201ENST00000496068 432 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 NPM1P21-201ENST00000513394 762 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC027026.1-201ENST00000532323 742 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 FAM27E4-201ENST00000605259 342 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AL359091.1-201ENST00000449048 1734 ntBASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RTFDC1Q9BY42 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
RTFDC1Q9BY42 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
RTFDC1Q9BY42 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.34□□□□□ -1.24
RTFDC1Q9BY42 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RTFDC1Q9BY42 HDAC1P2-201ENST00000453661 1398 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC090220.1-201ENST00000593078 1699 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 SEPT7P8-201ENST00000413308 775 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 NPM1P4-201ENST00000414095 812 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 RPL36P18-201ENST00000419316 318 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC007394.1-201ENST00000421941 531 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC126120.1-201ENST00000431082 470 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 RPS23P6-201ENST00000466136 431 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 PCNAP1-201ENST00000505363 709 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 SUMO2P19-201ENST00000518920 295 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 IGLV2-28-201ENST00000520681 304 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 IGHV1-14-201ENST00000523391 241 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC092451.2-201ENST00000538746 658 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 CR383656.14-201ENST00000551951 406 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC119403.2-201ENST00000590960 598 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC020916.2-201ENST00000591242 360 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC016542.1-201ENST00000608259 493 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC079395.2-201ENST00000610982 737 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AC016769.4-201ENST00000616893 535 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 AL359195.2-201ENST00000623657 4412 ntBASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.33□□□□□ -1.24
RTFDC1Q9BY42 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 AC005618.1-201ENST00000606901 3148 ntBASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RTFDC1Q9BY42 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms