Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CCDC7Q96M83 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC8.07□□□□□ -1.12
CCDC7Q96M83 AC002504.1-201ENST00000438281 691 ntBASIC8.07□□□□□ -1.12
CCDC7Q96M83 RN7SL515P-201ENST00000463999 297 ntBASIC8.07□□□□□ -1.12
CCDC7Q96M83 RN7SL57P-201ENST00000493687 290 ntBASIC8.07□□□□□ -1.12
CCDC7Q96M83 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC7Q96M83 RNA5SP116-201ENST00000516132 98 ntBASIC8.07□□□□□ -1.12
CCDC7Q96M83 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC7Q96M83 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC7Q96M83 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.07□□□□□ -1.12
CCDC7Q96M83 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC7Q96M83 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC8.07□□□□□ -1.12
CCDC7Q96M83 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC7Q96M83 PDZK1P1-202ENST00000425209 1350 ntBASIC8.07□□□□□ -1.12
CCDC7Q96M83 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 AC053481.2-202ENST00000582394 1500 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
CCDC7Q96M83 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.06□□□□□ -1.12
CCDC7Q96M83 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.06□□□□□ -1.12
CCDC7Q96M83 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CCDC7Q96M83 SNORA64.1-201ENST00000362600 132 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 BMS1P17-202ENST00000416720 316 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 AC127526.2-201ENST00000426436 775 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC8.06□□□□□ -1.12
CCDC7Q96M83 AL627308.1-201ENST00000435693 821 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.06□□□□□ -1.12
CCDC7Q96M83 AC073909.1-201ENST00000447112 999 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 RPS17P15-201ENST00000475609 349 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 NENFP3-201ENST00000503735 313 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 AC060780.2-201ENST00000589047 198 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 AC008536.1-201ENST00000602872 669 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.06□□□□□ -1.12
CCDC7Q96M83 AC018445.2-201ENST00000622987 260 ntBASIC8.06□□□□□ -1.12
CCDC7Q96M83 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CCDC7Q96M83 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 RNA5SP46-201ENST00000362370 120 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 PDCL3P4-201ENST00000489621 720 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 AC073610.1-201ENST00000489971 396 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 EIF3LP3-201ENST00000495197 822 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 DPPA3P2-202ENST00000557188 1219 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 DPPA2P4-201ENST00000563717 878 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 AC096996.1-201ENST00000563813 325 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 AL513327.3-201ENST00000602618 469 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 AL133481.2-203ENST00000607558 139 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 AC211433.2-201ENST00000608433 387 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CCDC7Q96M83 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 AL355834.1-201ENST00000556602 3965 ntBASIC8.05□□□□□ -1.12
CCDC7Q96M83 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
CCDC7Q96M83 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CCDC7Q96M83 AP002991.2-201ENST00000623807 2801 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 AL359955.1-201ENST00000455242 3275 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 AC009962.1-201ENST00000567327 3813 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CCDC7Q96M83 AL391422.1-201ENST00000402155 436 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.04□□□□□ -1.12
CCDC7Q96M83 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.04□□□□□ -1.12
CCDC7Q96M83 CRIP1P1-201ENST00000427567 185 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CCDC7Q96M83 DEFA9P-201ENST00000433042 285 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 OR7E116P-201ENST00000448529 957 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 GAPDHP71-201ENST00000511530 1003 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.04□□□□□ -1.12
CCDC7Q96M83 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.04□□□□□ -1.12
CCDC7Q96M83 HSPE1P2-201ENST00000554777 306 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 HNRNPCP1-201ENST00000556181 766 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 AC015802.2-201ENST00000589690 189 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 AL691477.1-201ENST00000624398 162 ntBASIC8.04□□□□□ -1.12
CCDC7Q96M83 AC069542.2-201ENST00000624816 216 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms