Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC084033.1-201ENST00000550830 633 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC005244.1-201ENST00000582566 339 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AL136228.1-201ENST00000622221 319 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 AL354854.1-201ENST00000455940 1363 ntBASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.8□□□□□ -1.48
PDLIM5Q96HC4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 RAB5CP1-201ENST00000395972 580 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 SNRPEP6-201ENST00000407465 277 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 CRIP1P1-201ENST00000427567 185 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 ARAFP2-201ENST00000440565 559 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 RPL6P30-201ENST00000443382 862 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 RPL5P10-201ENST00000445207 894 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AC093166.3-201ENST00000448785 303 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AGGF1P3-201ENST00000493675 1213 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 RN7SKP34-201ENST00000516142 244 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 RPA2P1-201ENST00000556557 721 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AP000919.1-201ENST00000582850 985 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AC090236.2-201ENST00000587933 1101 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AC060780.2-201ENST00000589047 198 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AL133481.2-203ENST00000607558 139 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AP001437.1-201ENST00000608783 456 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AL359091.2-201ENST00000609303 556 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AC092266.1-201ENST00000610958 165 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 MIR6809-201ENST00000612189 116 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AL158062.1-201ENST00000619632 745 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AC096708.4-201ENST00000620563 552 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 GTF2IP4-201ENST00000453092 2054 ntBASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM5Q96HC4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC009962.1-201ENST00000567327 3813 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AL672167.2-201ENST00000377164 879 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AL035696.2-201ENST00000407941 709 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 FTLP19-201ENST00000433300 394 ntBASIC5.78□□□□□ -1.48
PDLIM5Q96HC4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms