Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 HMGN2P47-201ENST00000559378 272 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC023389.2-201ENST00000580031 955 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 AC015802.2-201ENST00000589690 189 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 MFSD8-219ENST00000641228 2559 ntBASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ECHDC3Q96DC8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC117409.1-201ENST00000470499 1310 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 MFSD8-239ENST00000641590 2479 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 RNF19BPY-201ENST00000458209 1550 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AL022331.1-201ENST00000429025 477 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC016724.1-201ENST00000453215 421 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 FRG2FP-204ENST00000453982 852 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 RNU1-88P-201ENST00000459274 128 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 RPS23P6-201ENST00000466136 431 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 RPSAP37-201ENST00000470913 821 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC079080.1-201ENST00000479841 822 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC022215.1-201ENST00000481770 362 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC105384.2-201ENST00000508433 640 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 UGT2A3P7-201ENST00000510485 734 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC135626.1-201ENST00000556983 435 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC096996.1-201ENST00000563813 325 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AP001496.3-201ENST00000580230 913 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC140479.2-201ENST00000421567 3130 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AP000432.2-201ENST00000624164 2048 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 AC007159.1-201ENST00000566529 4706 ntBASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ECHDC3Q96DC8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC099654.3-201ENST00000447087 1546 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 GNG5P2-201ENST00000372054 207 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 OR2W4P-201ENST00000406496 926 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 SUMO2P3-201ENST00000438311 288 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 RN7SL570P-201ENST00000484405 292 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 PPIAP19-201ENST00000486414 492 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC073610.1-201ENST00000489971 396 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC074255.1-201ENST00000511259 501 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 SCARNA6.1-201ENST00000516989 238 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 OR4A6P-201ENST00000534364 970 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC008521.2-201ENST00000591021 259 ntBASIC5.81□□□□□ -1.48
ECHDC3Q96DC8 AC127024.6-201ENST00000621598 424 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms