Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 CDY7P-201ENST00000429883 1604 ntBASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SMC1BQ8NDV3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 RNA5SP507-201ENST00000363603 121 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 MIR640-201ENST00000385086 96 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 MIR550A3-201ENST00000390735 95 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AL391422.1-201ENST00000402155 436 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 ARAFP1-201ENST00000422172 605 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC073310.1-201ENST00000423226 1033 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 TNPO1P1-201ENST00000423641 1138 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC245452.2-201ENST00000435222 392 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 GSTA7P-201ENST00000438425 448 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC011225.1-201ENST00000457751 369 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 OR2AO1P-201ENST00000476497 403 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC093267.1-201ENST00000489176 961 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC109481.1-201ENST00000509173 282 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 OR51K1P-201ENST00000510214 950 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC068339.2-201ENST00000534395 618 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 CKS1BP1-201ENST00000555221 240 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 OR1AB1P-201ENST00000585564 761 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AC010333.3-201ENST00000615100 402 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AP006248.3-201ENST00000623580 594 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 AP000550.3-201ENST00000637734 379 ntBASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.46□□□□□ -1.22
SMC1BQ8NDV3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 PABPC1P6-201ENST00000445594 1829 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AL133243.2-201ENST00000610331 1621 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AL354890.1-201ENST00000413730 346 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 RPL23AP27-201ENST00000415161 451 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 RPS7P14-201ENST00000426405 583 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 GAPDHP75-201ENST00000433910 943 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 FABP5P2-201ENST00000439042 408 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 TXNP2-201ENST00000443918 295 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 TRIM60P16-201ENST00000444048 694 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 FTLP8-201ENST00000446770 267 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 EIF2S2P5-201ENST00000457635 968 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AL672167.3-201ENST00000465951 960 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 CEACAMP10-202ENST00000495431 496 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 SUMO2P19-201ENST00000518920 295 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 OR4V1P-201ENST00000525394 1140 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 MIR4776-2-201ENST00000580204 80 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AP002884.5-201ENST00000595053 1132 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC091768.1-201ENST00000609258 930 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC091046.2-201ENST00000620775 665 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AP000943.4-201ENST00000622912 357 ntBASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AP004289.1-201ENST00000436307 2205 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms