Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL049634.3-201ENST00000604968 457 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL121928.1-201ENST00000608017 521 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL590282.1-201ENST00000610379 1136 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 7SK.12-201ENST00000612820 244 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC243756.2-201ENST00000618406 463 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL136221.1-201ENST00000621449 509 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC093591.3-201ENST00000634516 308 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 MIR3191-201ENST00000636300 76 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AC107980.1-201ENST00000558671 3355 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 AL133243.2-201ENST00000610331 1621 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 CASC19-280ENST00000642102 1351 ntBASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
DEPDC4Q8N2C3 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC090220.1-201ENST00000593078 1699 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 MAPK10-319ENST00000641459 2542 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 MIR425-201ENST00000362162 87 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 RNU6-116P-201ENST00000384042 109 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 RNU6-1122P-201ENST00000384449 107 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 MT-TD-201ENST00000387419 68 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL589647.1-201ENST00000402485 466 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 NACAP7-201ENST00000407371 609 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL136968.2-201ENST00000407959 354 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 RN7SKP181-201ENST00000411188 316 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 BOLA3P4-201ENST00000418151 400 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC083875.1-201ENST00000419509 405 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC073335.1-201ENST00000427776 363 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL122003.1-201ENST00000435206 784 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 CACYBPP1-201ENST00000438592 684 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL035417.1-201ENST00000442754 214 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 USP9YP12-201ENST00000450481 570 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 PPIAP28-201ENST00000458378 485 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC074386.1-201ENST00000476560 767 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC091951.2-201ENST00000500762 203 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 RNA5SP159-201ENST00000517161 103 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AP001893.2-201ENST00000526949 202 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC016954.1-201ENST00000549976 745 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 ANP32BP3-201ENST00000559213 706 ntBASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.44□□□□□ -1.22
DEPDC4Q8N2C3 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms