Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PPBPP2-201ENST00000513150 1362 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 RNU6-1263P-201ENST00000384601 106 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 RNU6-1320P-201ENST00000390838 107 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 RNU6-1269P-201ENST00000391139 107 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 ADAM24P-201ENST00000398655 2101 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 RPL12P12-201ENST00000424633 501 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AL022324.2-201ENST00000434827 780 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 ZNF619P1-201ENST00000446539 752 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC016027.4-201ENST00000450866 277 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 OSTCP1-201ENST00000455507 450 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 RNU6-599P-201ENST00000459383 107 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 RNU6-1193P-201ENST00000459461 107 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC079080.1-201ENST00000479841 822 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC083795.1-201ENST00000491760 320 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 SNX18P25-201ENST00000510539 758 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC005224.3-201ENST00000584683 2140 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC119403.2-201ENST00000590960 598 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC011891.2-201ENST00000604949 397 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC092944.2-201ENST00000605443 889 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 RFPL4AP6-201ENST00000616792 846 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 RNU6-368P-201ENST00000620928 107 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 RNU6-538P-201ENST00000622329 107 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 MTCO1P1-201ENST00000624263 1081 ntBASIC5.97□□□□□ -1.45
RAPH1Q70E73 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.97□□□□□ -1.45
RAPH1Q70E73 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAPH1Q70E73 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
RAPH1Q70E73 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.96□□□□□ -1.45
RAPH1Q70E73 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.96□□□□□ -1.45
RAPH1Q70E73 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
RAPH1Q70E73 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RAPH1Q70E73 AL034546.1-201ENST00000623740 3693 ntBASIC5.96□□□□□ -1.45
RAPH1Q70E73 AC016745.2-201ENST00000608834 3443 ntBASIC5.96□□□□□ -1.45
RAPH1Q70E73 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
RAPH1Q70E73 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
RAPH1Q70E73 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
RAPH1Q70E73 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 RN7SKP128-201ENST00000364270 303 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 AL132875.1-201ENST00000403623 949 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 AL139805.1-201ENST00000407837 289 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 RPL35AP31-201ENST00000418340 337 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 KRT8P51-201ENST00000438938 274 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 RN7SL836P-201ENST00000476140 296 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 SNORA74.1-201ENST00000516320 180 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 AC113191.1-201ENST00000517759 403 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 NPIPB14P-203ENST00000532298 987 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RAPH1Q70E73 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.96□□□□□ -1.46
RAPH1Q70E73 AC007346.2-201ENST00000564816 892 ntBASIC5.96□□□□□ -1.46
RAPH1Q70E73 AP000919.1-201ENST00000582850 985 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms