Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CL1P78423 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CL1P78423 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CL1P78423 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CL1P78423 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC140134.1-201ENST00000511830 3544 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CX3CL1P78423 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 MIR433-201ENST00000384837 93 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CX3CL1P78423 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 AL157702.1-201ENST00000398764 426 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 GSTA12P-201ENST00000402398 508 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 AL121835.1-201ENST00000404250 354 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC112492.2-201ENST00000432774 1030 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 AL590399.4-201ENST00000436561 601 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC00328-2P-201ENST00000436585 219 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 Z84478.1-201ENST00000438230 1219 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 CXCR2P1-202ENST00000443392 1074 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 AL022237.1-201ENST00000446663 358 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC108729.2-201ENST00000476543 840 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 HMGB1P3-201ENST00000502802 616 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.98□□□□□ -1.61
CX3CL1P78423 SUMO2P4-201ENST00000504193 276 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.98□□□□□ -1.61
CX3CL1P78423 MTND3P3-201ENST00000505004 126 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.98□□□□□ -1.61
CX3CL1P78423 UGT2A3P7-201ENST00000510485 734 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC027338.1-201ENST00000514840 825 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 RNA5SP400-201ENST00000517155 111 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 OR4A46P-201ENST00000527255 933 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 MT1CP-201ENST00000567054 174 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC084824.5-201ENST00000612009 413 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 AC012676.3-201ENST00000614983 479 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CL1P78423 AL445493.3-201ENST00000619568 477 ntBASIC4.98□□□□□ -1.61
CX3CL1P78423 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CL1P78423 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CX3CL1P78423 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CL1P78423 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 AL355834.1-201ENST00000556602 3965 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AC232271.1-201ENST00000602455 2715 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AL121839.2-201ENST00000565058 6943 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.97□□□□□ -1.61
CX3CL1P78423 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.97□□□□□ -1.61
CX3CL1P78423 NLRP3P1-201ENST00000622303 1785 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CX3CL1P78423 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CX3CL1P78423 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CX3CL1P78423 AL445238.1-204ENST00000400311 463 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 Z86062.1-201ENST00000406773 777 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 RPL7AP51-201ENST00000422016 760 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 RPL7AP14-201ENST00000424041 802 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 VN1R20P-201ENST00000425215 966 ntBASIC4.97□□□□□ -1.61
CX3CL1P78423 UBE2V1P6-201ENST00000430840 422 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms