Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 RSU1P1-201ENST00000453416 441 ntBASIC4.36□□□□□ -1.71
CMC4P56277 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.36□□□□□ -1.71
CMC4P56277 NENFP3-201ENST00000503735 313 ntBASIC4.36□□□□□ -1.71
CMC4P56277 AC111000.5-201ENST00000506559 1178 ntBASIC4.36□□□□□ -1.71
CMC4P56277 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.36□□□□□ -1.71
CMC4P56277 Y_RNA.667-201ENST00000516212 107 ntBASIC4.36□□□□□ -1.71
CMC4P56277 RNA5SP438-201ENST00000516561 112 ntBASIC4.36□□□□□ -1.71
CMC4P56277 SNORA70.20-201ENST00000516848 126 ntBASIC4.36□□□□□ -1.71
CMC4P56277 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.36□□□□□ -1.71
CMC4P56277 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.36□□□□□ -1.71
CMC4P56277 AC126615.2-201ENST00000553003 515 ntBASIC4.36□□□□□ -1.71
CMC4P56277 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.36□□□□□ -1.71
CMC4P56277 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.36□□□□□ -1.71
CMC4P56277 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.36□□□□□ -1.71
CMC4P56277 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.36□□□□□ -1.71
CMC4P56277 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.36□□□□□ -1.71
CMC4P56277 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.36□□□□□ -1.71
CMC4P56277 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC4.36□□□□□ -1.71
CMC4P56277 TXNP4-201ENST00000575018 310 ntBASIC4.36□□□□□ -1.71
CMC4P56277 AC005726.4-201ENST00000582858 458 ntBASIC4.36□□□□□ -1.71
CMC4P56277 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.36□□□□□ -1.71
CMC4P56277 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.36□□□□□ -1.71
CMC4P56277 AC108865.2-201ENST00000606881 432 ntBASIC4.36□□□□□ -1.71
CMC4P56277 AL365181.4-201ENST00000609800 547 ntBASIC4.36□□□□□ -1.71
CMC4P56277 FO681491.1-202ENST00000623392 737 ntBASIC4.36□□□□□ -1.71
CMC4P56277 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.36□□□□□ -1.71
CMC4P56277 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.36□□□□□ -1.71
CMC4P56277 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CMC4P56277 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.36□□□□□ -1.71
CMC4P56277 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.36□□□□□ -1.71
CMC4P56277 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.36□□□□□ -1.71
CMC4P56277 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CMC4P56277 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.36□□□□□ -1.71
CMC4P56277 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CMC4P56277 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CMC4P56277 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CMC4P56277 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.35□□□□□ -1.71
CMC4P56277 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.35□□□□□ -1.71
CMC4P56277 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CMC4P56277 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.35□□□□□ -1.71
CMC4P56277 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CMC4P56277 OR7E156P-201ENST00000400303 464 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.35□□□□□ -1.71
CMC4P56277 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.35□□□□□ -1.71
CMC4P56277 AL138899.2-201ENST00000439139 499 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC015983.1-201ENST00000441577 373 ntBASIC4.35□□□□□ -1.71
CMC4P56277 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.35□□□□□ -1.71
CMC4P56277 AP006222.1-205ENST00000450734 457 ntBASIC4.35□□□□□ -1.71
CMC4P56277 LRRC37A14P-201ENST00000452297 462 ntBASIC4.35□□□□□ -1.71
CMC4P56277 PSAT1P4-201ENST00000466500 526 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC011476.1-201ENST00000466725 307 ntBASIC4.35□□□□□ -1.71
CMC4P56277 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.35□□□□□ -1.71
CMC4P56277 NDUFA5P5-201ENST00000468361 342 ntBASIC4.35□□□□□ -1.71
CMC4P56277 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 RPS17P15-201ENST00000475609 349 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC022215.1-201ENST00000481770 362 ntBASIC4.35□□□□□ -1.71
CMC4P56277 PDCL3P4-201ENST00000489621 720 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.35□□□□□ -1.71
CMC4P56277 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.35□□□□□ -1.71
CMC4P56277 AC090424.1-201ENST00000535243 736 ntBASIC4.35□□□□□ -1.71
CMC4P56277 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.35□□□□□ -1.71
CMC4P56277 AC006530.1-201ENST00000555980 571 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.35□□□□□ -1.71
CMC4P56277 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 OOSP1P2-201ENST00000579644 351 ntBASIC4.35□□□□□ -1.71
CMC4P56277 PRELID3BP3-201ENST00000584963 545 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AL513327.3-201ENST00000602618 469 ntBASIC4.35□□□□□ -1.71
CMC4P56277 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 AC129915.3-201ENST00000634128 948 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC016251.2-201ENST00000623393 3089 ntBASIC4.35□□□□□ -1.71
CMC4P56277 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.35□□□□□ -1.71
CMC4P56277 NEPNP-201ENST00000404786 1371 ntBASIC4.35□□□□□ -1.71
CMC4P56277 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CMC4P56277 AC106872.5-201ENST00000508856 1416 ntBASIC4.35□□□□□ -1.71
CMC4P56277 PSG10P-201ENST00000501199 1500 ntBASIC4.35□□□□□ -1.71
CMC4P56277 AC062029.1-202ENST00000606164 3651 ntBASIC4.35□□□□□ -1.71
CMC4P56277 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CMC4P56277 ZNF812P-201ENST00000457674 1694 ntBASIC4.35□□□□□ -1.71
CMC4P56277 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms