Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OFD1P17-201ENST00000437639 3018 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AC012254.3-201ENST00000591183 2117 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 RBPJP7-201ENST00000442803 1447 ntBASIC5.81□□□□□ -1.48
PDX1P52945 RBPJP5-201ENST00000449433 1447 ntBASIC5.81□□□□□ -1.48
PDX1P52945 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 AC020656.2-201ENST00000613291 5309 ntBASIC5.81□□□□□ -1.48
PDX1P52945 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.81□□□□□ -1.48
PDX1P52945 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDX1P52945 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 NEPNP-201ENST00000404786 1371 ntBASIC5.8□□□□□ -1.48
PDX1P52945 HDAC1P2-201ENST00000453661 1398 ntBASIC5.8□□□□□ -1.48
PDX1P52945 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PDX1P52945 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.8□□□□□ -1.48
PDX1P52945 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDX1P52945 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDX1P52945 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 OR7E101P-201ENST00000400428 513 ntBASIC5.8□□□□□ -1.48
PDX1P52945 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.8□□□□□ -1.48
PDX1P52945 RNA5SP251-201ENST00000410614 137 ntBASIC5.8□□□□□ -1.48
PDX1P52945 HMGA1P8-201ENST00000414130 321 ntBASIC5.8□□□□□ -1.48
PDX1P52945 SDHDP6-201ENST00000414693 480 ntBASIC5.8□□□□□ -1.48
PDX1P52945 Z93019.1-201ENST00000416450 973 ntBASIC5.8□□□□□ -1.48
PDX1P52945 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.8□□□□□ -1.48
PDX1P52945 KIF4CP-201ENST00000422742 1279 ntBASIC5.8□□□□□ -1.48
PDX1P52945 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.8□□□□□ -1.48
PDX1P52945 TRGV7-201ENST00000427089 353 ntBASIC5.8□□□□□ -1.48
PDX1P52945 ARL4AP4-201ENST00000434170 518 ntBASIC5.8□□□□□ -1.48
PDX1P52945 AC097523.2-201ENST00000435551 652 ntBASIC5.8□□□□□ -1.48
PDX1P52945 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.8□□□□□ -1.48
PDX1P52945 AC016027.4-201ENST00000450866 277 ntBASIC5.8□□□□□ -1.48
PDX1P52945 YWHAEP1-201ENST00000453697 763 ntBASIC5.8□□□□□ -1.48
PDX1P52945 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.8□□□□□ -1.48
PDX1P52945 AC115223.1-201ENST00000466377 870 ntBASIC5.8□□□□□ -1.48
PDX1P52945 RPSAP37-201ENST00000470913 821 ntBASIC5.8□□□□□ -1.48
PDX1P52945 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.8□□□□□ -1.48
PDX1P52945 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 CCNHP1-201ENST00000513311 678 ntBASIC5.8□□□□□ -1.48
PDX1P52945 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.8□□□□□ -1.48
PDX1P52945 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.8□□□□□ -1.48
PDX1P52945 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.8□□□□□ -1.48
PDX1P52945 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.8□□□□□ -1.48
PDX1P52945 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.8□□□□□ -1.48
PDX1P52945 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.8□□□□□ -1.48
PDX1P52945 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
PDX1P52945 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.8□□□□□ -1.48
PDX1P52945 AC141002.1-201ENST00000607025 279 ntBASIC5.8□□□□□ -1.48
PDX1P52945 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.8□□□□□ -1.48
PDX1P52945 PCA3_2.1-201ENST00000612507 409 ntBASIC5.8□□□□□ -1.48
PDX1P52945 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.8□□□□□ -1.48
PDX1P52945 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDX1P52945 AC078880.4-201ENST00000617627 1749 ntBASIC5.79□□□□□ -1.48
PDX1P52945 WDR95P-201ENST00000425638 1542 ntBASIC5.79□□□□□ -1.48
PDX1P52945 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDX1P52945 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
PDX1P52945 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PDX1P52945 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 MIR375-201ENST00000362103 64 ntBASIC5.79□□□□□ -1.48
PDX1P52945 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDX1P52945 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDX1P52945 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.79□□□□□ -1.48
PDX1P52945 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.79□□□□□ -1.48
PDX1P52945 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.79□□□□□ -1.48
PDX1P52945 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms