Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 RNU6-819P-201ENST00000364116 107 ntBASIC7.29□□□□□ -1.24
MRE11P49959 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.29□□□□□ -1.24
MRE11P49959 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
MRE11P49959 RN7SKP216-201ENST00000411050 312 ntBASIC7.29□□□□□ -1.24
MRE11P49959 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 GAPDHP57-201ENST00000424400 585 ntBASIC7.29□□□□□ -1.24
MRE11P49959 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.29□□□□□ -1.24
MRE11P49959 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 MAPRE1P3-201ENST00000435438 796 ntBASIC7.29□□□□□ -1.24
MRE11P49959 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 TPTE2P3-201ENST00000441562 1189 ntBASIC7.29□□□□□ -1.24
MRE11P49959 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.29□□□□□ -1.24
MRE11P49959 MTATP6P26-201ENST00000445926 662 ntBASIC7.29□□□□□ -1.24
MRE11P49959 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.29□□□□□ -1.24
MRE11P49959 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 AC091874.2-201ENST00000505889 720 ntBASIC7.29□□□□□ -1.24
MRE11P49959 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.29□□□□□ -1.24
MRE11P49959 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.29□□□□□ -1.24
MRE11P49959 HNRNPRP2-201ENST00000528421 743 ntBASIC7.29□□□□□ -1.24
MRE11P49959 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.29□□□□□ -1.24
MRE11P49959 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.29□□□□□ -1.24
MRE11P49959 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC7.29□□□□□ -1.24
MRE11P49959 BNIP3P38-201ENST00000601117 544 ntBASIC7.29□□□□□ -1.24
MRE11P49959 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 ABI1P1-201ENST00000603375 1120 ntBASIC7.29□□□□□ -1.24
MRE11P49959 OR4H6P-202ENST00000603819 340 ntBASIC7.29□□□□□ -1.24
MRE11P49959 AF129408.1-201ENST00000608767 431 ntBASIC7.29□□□□□ -1.24
MRE11P49959 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 MTCO1P22-201ENST00000604619 1360 ntBASIC7.29□□□□□ -1.24
MRE11P49959 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
MRE11P49959 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
MRE11P49959 AC130360.2-201ENST00000533477 1556 ntBASIC7.29□□□□□ -1.24
MRE11P49959 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
MRE11P49959 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 AC027279.4-201ENST00000624371 2072 ntBASIC7.28□□□□□ -1.24
MRE11P49959 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.28□□□□□ -1.24
MRE11P49959 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.28□□□□□ -1.24
MRE11P49959 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
MRE11P49959 RN7SKP275-201ENST00000364626 301 ntBASIC7.28□□□□□ -1.24
MRE11P49959 RNA5SP85-201ENST00000365378 119 ntBASIC7.28□□□□□ -1.24
MRE11P49959 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.28□□□□□ -1.24
MRE11P49959 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 RN7SKP144-201ENST00000411108 279 ntBASIC7.28□□□□□ -1.24
MRE11P49959 Y_RNA.625-201ENST00000411256 107 ntBASIC7.28□□□□□ -1.24
MRE11P49959 RPLP1P10-201ENST00000413972 339 ntBASIC7.28□□□□□ -1.24
MRE11P49959 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 BX276092.6-201ENST00000430476 250 ntBASIC7.28□□□□□ -1.24
MRE11P49959 Z85994.2-201ENST00000434327 452 ntBASIC7.28□□□□□ -1.24
MRE11P49959 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.28□□□□□ -1.24
MRE11P49959 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.28□□□□□ -1.24
MRE11P49959 RPL23AP28-201ENST00000448062 470 ntBASIC7.28□□□□□ -1.24
MRE11P49959 BX276092.8-201ENST00000455722 250 ntBASIC7.28□□□□□ -1.24
MRE11P49959 UOX-201ENST00000471089 899 ntBASIC7.28□□□□□ -1.24
MRE11P49959 AC022415.1-202ENST00000486612 523 ntBASIC7.28□□□□□ -1.24
MRE11P49959 TRAV31-201ENST00000502780 342 ntBASIC7.28□□□□□ -1.24
MRE11P49959 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.28□□□□□ -1.24
MRE11P49959 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
MRE11P49959 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC7.28□□□□□ -1.24
MRE11P49959 RN7SKP253-201ENST00000516424 309 ntBASIC7.28□□□□□ -1.24
MRE11P49959 SNORA70.17-201ENST00000516449 133 ntBASIC7.28□□□□□ -1.24
MRE11P49959 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.28□□□□□ -1.24
MRE11P49959 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
MRE11P49959 AC104072.1-201ENST00000568817 668 ntBASIC7.28□□□□□ -1.24
MRE11P49959 MIR3189-201ENST00000578735 73 ntBASIC7.28□□□□□ -1.24
MRE11P49959 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.28□□□□□ -1.24
MRE11P49959 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.28□□□□□ -1.24
MRE11P49959 AC006116.7-201ENST00000590141 756 ntBASIC7.28□□□□□ -1.24
MRE11P49959 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.28□□□□□ -1.24
MRE11P49959 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.28□□□□□ -1.24
MRE11P49959 ZNF92P2-201ENST00000600543 1059 ntBASIC7.28□□□□□ -1.24
MRE11P49959 AL049840.6-201ENST00000604583 345 ntBASIC7.28□□□□□ -1.24
MRE11P49959 AC008626.2-201ENST00000624425 248 ntBASIC7.28□□□□□ -1.24
MRE11P49959 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.28□□□□□ -1.24
MRE11P49959 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 AL161912.4-201ENST00000623889 2468 ntBASIC7.28□□□□□ -1.24
MRE11P49959 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms