Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC092332.1-201ENST00000563684 829 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC090826.1-203ENST00000569235 490 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AL163952.1-202ENST00000569625 600 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 ARGFXP2-201ENST00000579304 949 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC068768.2-201ENST00000602352 343 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AC125494.2-201ENST00000602431 657 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 AL513327.3-201ENST00000602618 469 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AL133481.2-203ENST00000607558 139 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC004801.6-201ENST00000616571 978 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 MIR6721-201ENST00000617181 87 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
CX3CR1P49238 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 FBXL21-201ENST00000297158 1305 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.14□□□□□ -1.59
CX3CR1P49238 GTF2IP4-201ENST00000453092 2054 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC114774.1-201ENST00000507410 1770 ntBASIC5.14□□□□□ -1.59
CX3CR1P49238 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CR1P49238 AC016745.2-201ENST00000608834 3443 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CX3CR1P49238 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CX3CR1P49238 HSPD1P9-201ENST00000420325 1636 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CX3CR1P49238 SELENOWP1-201ENST00000322792 252 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CX3CR1P49238 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CX3CR1P49238 RPL11P3-201ENST00000395256 523 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 GCNT1P4-201ENST00000404096 329 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 SNORA81-201ENST00000408493 178 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 RN7SKP86-201ENST00000410454 332 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CR1P49238 FAM183DP-201ENST00000421987 399 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 CRIP1P1-201ENST00000427567 185 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 RPS27AP6-201ENST00000427962 448 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CR1P49238 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CR1P49238 AC096775.1-201ENST00000437724 448 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 RPS12P17-201ENST00000438591 377 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 BMS1P10-201ENST00000443754 1120 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 RPL5P7-201ENST00000444235 813 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 MTND6P5-201ENST00000448266 512 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 AC098847.1-201ENST00000473094 348 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 AC006539.1-201ENST00000481419 501 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 AL158068.1-201ENST00000506116 616 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CR1P49238 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.13□□□□□ -1.59
CX3CR1P49238 KCTD9P6-201ENST00000522306 950 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 AL121594.2-201ENST00000541658 472 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CR1P49238 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CR1P49238 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 AC002519.2-203ENST00000567043 837 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CR1P49238 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CR1P49238 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 AC096708.4-201ENST00000620563 552 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.13□□□□□ -1.59
CX3CR1P49238 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CR1P49238 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CX3CR1P49238 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.13□□□□□ -1.59
CX3CR1P49238 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CR1P49238 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 PSG10P-201ENST00000501199 1500 ntBASIC5.13□□□□□ -1.59
CX3CR1P49238 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CR1P49238 ADAM24P-201ENST00000398655 2101 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms