Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX2P48431 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 AC093909.5-201ENST00000621839 1799 ntBASIC5.49□□□□□ -1.53
SOX2P48431 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 AL121839.2-201ENST00000565058 6943 ntBASIC5.49□□□□□ -1.53
SOX2P48431 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SOX2P48431 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX2P48431 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX2P48431 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 AL359715.3-201ENST00000569267 2123 ntBASIC5.48□□□□□ -1.53
SOX2P48431 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SOX2P48431 AC239868.2-201ENST00000564237 4527 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AL353743.3-201ENST00000442109 1468 ntBASIC5.48□□□□□ -1.53
SOX2P48431 HDAC1P2-201ENST00000453661 1398 ntBASIC5.48□□□□□ -1.53
SOX2P48431 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 RNU5E-10P-201ENST00000363506 118 ntBASIC5.48□□□□□ -1.53
SOX2P48431 RN7SKP191-201ENST00000364713 306 ntBASIC5.48□□□□□ -1.53
SOX2P48431 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.48□□□□□ -1.53
SOX2P48431 MIR301B-201ENST00000390813 78 ntBASIC5.48□□□□□ -1.53
SOX2P48431 HMGB3P19-201ENST00000403971 560 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC096533.1-201ENST00000411645 353 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AL356968.2-201ENST00000412769 1257 ntBASIC5.48□□□□□ -1.53
SOX2P48431 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 PPIAP23-201ENST00000420099 497 ntBASIC5.48□□□□□ -1.53
SOX2P48431 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.48□□□□□ -1.53
SOX2P48431 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX2P48431 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 HMGB1P26-201ENST00000452520 628 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 AC073594.1-201ENST00000462065 364 ntBASIC5.48□□□□□ -1.53
SOX2P48431 RPS17P11-201ENST00000474297 293 ntBASIC5.48□□□□□ -1.53
SOX2P48431 RN7SL70P-201ENST00000478322 302 ntBASIC5.48□□□□□ -1.53
SOX2P48431 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.48□□□□□ -1.53
SOX2P48431 AC008427.1-201ENST00000503102 655 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC021146.5-201ENST00000503544 545 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC138409.2-202ENST00000507274 458 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX2P48431 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 ENPP7P3-201ENST00000509123 241 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC090568.1-201ENST00000509499 856 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX2P48431 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 BUD31P1-201ENST00000521828 359 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX2P48431 HNRNPCP8-201ENST00000528764 888 ntBASIC5.48□□□□□ -1.53
SOX2P48431 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.48□□□□□ -1.53
SOX2P48431 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 AGGF1P5-201ENST00000567900 919 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC124283.4-201ENST00000581815 456 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC027229.1-201ENST00000583887 253 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 AL589863.1-201ENST00000595383 631 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 AC073046.2-201ENST00000604756 527 ntBASIC5.48□□□□□ -1.53
SOX2P48431 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 AL352984.2-201ENST00000611153 546 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AC087683.2-201ENST00000611384 326 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AL078595.3-201ENST00000623815 1166 ntBASIC5.48□□□□□ -1.53
SOX2P48431 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 LINC02495-203ENST00000636704 242 ntBASIC5.48□□□□□ -1.53
SOX2P48431 AP000550.3-201ENST00000637734 379 ntBASIC5.48□□□□□ -1.53
SOX2P48431 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.48□□□□□ -1.53
SOX2P48431 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX2P48431 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX2P48431 SAMMSON-210ENST00000641260 1308 ntBASIC5.48□□□□□ -1.53
SOX2P48431 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 ZNF90P1-201ENST00000480493 1951 ntBASIC5.47□□□□□ -1.53
SOX2P48431 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX2P48431 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms