Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.96□□□□□ -1.61
NKX2-1P43699 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.96□□□□□ -1.61
NKX2-1P43699 AC016583.1-201ENST00000624221 2431 ntBASIC4.96□□□□□ -1.61
NKX2-1P43699 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NKX2-1P43699 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 PPBPP2-201ENST00000513150 1362 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 RNU6-729P-201ENST00000384399 107 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NKX2-1P43699 RNU2-22P-201ENST00000411266 212 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 OR52N3P-201ENST00000413417 934 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 PTCD2P2-201ENST00000415579 1095 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 RPL18AP14-201ENST00000417685 526 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AL672212.1-201ENST00000422246 400 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 REREP1Y-201ENST00000422655 198 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AL354766.1-201ENST00000423396 542 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AC093084.1-201ENST00000424233 687 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 MTND4LP13-201ENST00000425022 298 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 SEC63P1-201ENST00000425785 1258 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AC083862.1-201ENST00000427378 1242 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 PSMD8P1-201ENST00000436275 769 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 REREP2Y-201ENST00000439103 200 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AL020997.1-201ENST00000446554 349 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AL354872.1-201ENST00000456361 967 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC079080.1-201ENST00000479841 822 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 CR383656.1-201ENST00000484916 377 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 UGT2A3P7-201ENST00000510485 734 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.96□□□□□ -1.62
NKX2-1P43699 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AP004607.5-201ENST00000532034 217 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 RPL3P13-201ENST00000550415 216 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.96□□□□□ -1.62
NKX2-1P43699 AP002884.5-201ENST00000595053 1132 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 OR4H6P-202ENST00000603819 340 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AC135803.1-201ENST00000608748 565 ntBASIC4.96□□□□□ -1.62
NKX2-1P43699 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
NKX2-1P43699 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NKX2-1P43699 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-1P43699 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 AL512283.1-201ENST00000606756 1384 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NKX2-1P43699 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NKX2-1P43699 MIR133A2-201ENST00000347538 102 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 RN7SKP166-201ENST00000410812 305 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 AL158827.1-201ENST00000416300 391 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 OR5W1P-201ENST00000423705 938 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-1P43699 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-1P43699 MTND4LP7-201ENST00000431728 294 ntBASIC4.95□□□□□ -1.62
NKX2-1P43699 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-1P43699 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NKX2-1P43699 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms