Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RBPJP7-201ENST00000442803 1447 ntBASIC5.09□□□□□ -1.59
USF1P22415 RBPJP5-201ENST00000449433 1447 ntBASIC5.09□□□□□ -1.59
USF1P22415 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 NEPNP-201ENST00000404786 1371 ntBASIC5.09□□□□□ -1.59
USF1P22415 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 AC020656.2-201ENST00000613291 5309 ntBASIC5.09□□□□□ -1.59
USF1P22415 CCNT2P1-201ENST00000423082 1315 ntBASIC5.09□□□□□ -1.59
USF1P22415 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USF1P22415 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 SNORA43.1-201ENST00000364863 140 ntBASIC5.09□□□□□ -1.59
USF1P22415 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USF1P22415 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 AC245060.4-201ENST00000413293 1121 ntBASIC5.09□□□□□ -1.59
USF1P22415 DPPA2P2-201ENST00000418220 897 ntBASIC5.09□□□□□ -1.59
USF1P22415 AC117434.1-201ENST00000419971 836 ntBASIC5.09□□□□□ -1.59
USF1P22415 MARK2P12-201ENST00000420129 585 ntBASIC5.09□□□□□ -1.59
USF1P22415 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.09□□□□□ -1.59
USF1P22415 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 PCBP2P1-201ENST00000437262 977 ntBASIC5.09□□□□□ -1.59
USF1P22415 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.09□□□□□ -1.59
USF1P22415 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.09□□□□□ -1.59
USF1P22415 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.09□□□□□ -1.59
USF1P22415 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 AC090589.1-201ENST00000473109 362 ntBASIC5.09□□□□□ -1.59
USF1P22415 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.09□□□□□ -1.59
USF1P22415 RPS4XP14-201ENST00000493072 781 ntBASIC5.09□□□□□ -1.59
USF1P22415 AL136038.1-201ENST00000497246 351 ntBASIC5.09□□□□□ -1.59
USF1P22415 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 AC093815.1-201ENST00000508637 280 ntBASIC5.09□□□□□ -1.59
USF1P22415 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.09□□□□□ -1.59
USF1P22415 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.09□□□□□ -1.59
USF1P22415 AP000648.1-201ENST00000529682 397 ntBASIC5.09□□□□□ -1.59
USF1P22415 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USF1P22415 AC027544.3-201ENST00000535082 757 ntBASIC5.09□□□□□ -1.59
USF1P22415 AC135626.1-201ENST00000556983 435 ntBASIC5.09□□□□□ -1.59
USF1P22415 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 MIR4776-2-201ENST00000580204 80 ntBASIC5.09□□□□□ -1.59
USF1P22415 NPM1P45-201ENST00000583151 559 ntBASIC5.09□□□□□ -1.59
USF1P22415 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.09□□□□□ -1.59
USF1P22415 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.09□□□□□ -1.59
USF1P22415 AL031601.1-201ENST00000605702 394 ntBASIC5.09□□□□□ -1.59
USF1P22415 MIR6826-201ENST00000617808 98 ntBASIC5.09□□□□□ -1.59
USF1P22415 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.09□□□□□ -1.59
USF1P22415 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USF1P22415 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
USF1P22415 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USF1P22415 AL031595.2-201ENST00000624215 19071 ntBASIC5.09□□□□□ -1.6
USF1P22415 GUCY1B2-204ENST00000531898 1979 ntBASIC5.09□□□□□ -1.6
USF1P22415 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.08□□□□□ -1.6
USF1P22415 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 GNL2P1-201ENST00000451274 2190 ntBASIC5.08□□□□□ -1.6
USF1P22415 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.08□□□□□ -1.6
USF1P22415 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.08□□□□□ -1.6
USF1P22415 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
USF1P22415 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.08□□□□□ -1.6
USF1P22415 MIR433-201ENST00000384837 93 ntBASIC5.08□□□□□ -1.6
USF1P22415 U3.23-201ENST00000391132 200 ntBASIC5.08□□□□□ -1.6
USF1P22415 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 AL096829.1-201ENST00000413677 457 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC017078.1-201ENST00000416146 368 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 AC064862.4-201ENST00000442180 334 ntBASIC5.08□□□□□ -1.6
USF1P22415 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
USF1P22415 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.08□□□□□ -1.6
USF1P22415 ZNF619P1-201ENST00000446539 752 ntBASIC5.08□□□□□ -1.6
USF1P22415 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USF1P22415 AL445466.1-201ENST00000448432 357 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC009963.4-201ENST00000448535 339 ntBASIC5.08□□□□□ -1.6
USF1P22415 YWHAEP1-201ENST00000453697 763 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.08□□□□□ -1.6
USF1P22415 AC023141.9-201ENST00000458734 412 ntBASIC5.08□□□□□ -1.6
USF1P22415 RN7SL177P-201ENST00000476596 299 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC083795.1-201ENST00000491760 320 ntBASIC5.08□□□□□ -1.6
USF1P22415 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.08□□□□□ -1.6
USF1P22415 NPM1P21-201ENST00000513394 762 ntBASIC5.08□□□□□ -1.6
USF1P22415 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.08□□□□□ -1.6
USF1P22415 OR56A7P-201ENST00000524865 941 ntBASIC5.08□□□□□ -1.6
USF1P22415 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.08□□□□□ -1.6
USF1P22415 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.08□□□□□ -1.6
USF1P22415 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.08□□□□□ -1.6
USF1P22415 HNRNPCP1-201ENST00000556181 766 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms