Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPS12P17-201ENST00000438591 377 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 CFL1P4-201ENST00000451536 498 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC144530.1-201ENST00000452862 555 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFRAP16234 OSTCP1-201ENST00000455507 450 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 RPL12P24-201ENST00000474907 486 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 RNU4-18P-201ENST00000516751 149 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC068305.2-201ENST00000550567 1205 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFRAP16234 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFRAP16234 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 LSM1P2-201ENST00000604911 322 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC108865.2-201ENST00000606881 432 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC015982.1-201ENST00000608113 465 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 MIR6809-201ENST00000612189 116 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 NF1P10-201ENST00000613227 742 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AL445670.1-201ENST00000618889 801 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 FO681491.1-202ENST00000623392 737 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
PDGFRAP16234 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.2□□□□□ -1.42
PDGFRAP16234 AL137141.1-201ENST00000624622 4836 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFRAP16234 DNM1P47-203ENST00000571780 12667 ntBASIC6.2□□□□□ -1.42
PDGFRAP16234 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFRAP16234 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PDGFRAP16234 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFRAP16234 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDGFRAP16234 RNA5SP273-201ENST00000362484 113 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 REREP1Y-201ENST00000422655 198 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC079807.1-201ENST00000429993 481 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 USP24P1-201ENST00000433802 779 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 REREP2Y-201ENST00000439103 200 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 BX679664.2-201ENST00000439282 283 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFRAP16234 RPL38P3-201ENST00000484463 213 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFRAP16234 Y_RNA.667-201ENST00000516212 107 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 snoU109.5-201ENST00000516231 132 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 MIR2117-201ENST00000516780 80 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.19□□□□□ -1.42
PDGFRAP16234 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC084033.1-201ENST00000550830 633 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 GARSP1-201ENST00000570895 719 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFRAP16234 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFRAP16234 AC145423.1-201ENST00000605712 336 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 AL136131.3-201ENST00000607600 188 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 AL096712.1-201ENST00000614561 159 ntBASIC6.19□□□□□ -1.42
PDGFRAP16234 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFRAP16234 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFRAP16234 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDGFRAP16234 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFRAP16234 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.18□□□□□ -1.42
PDGFRAP16234 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PDGFRAP16234 PARP4P2-201ENST00000446672 3326 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.18□□□□□ -1.42
PDGFRAP16234 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 TMSB4XP2-201ENST00000335179 210 ntBASIC6.18□□□□□ -1.42
PDGFRAP16234 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDGFRAP16234 RN7SKP128-201ENST00000364270 303 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms