Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RN7SKP151-201ENST00000410230 316 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 MYL6P5-201ENST00000412707 459 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 RPS4XP5-201ENST00000419038 768 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 RPL34P3-201ENST00000421454 338 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AK3P5-201ENST00000432033 519 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 YWHAEP1-201ENST00000453697 763 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 OR4A40P-201ENST00000533878 948 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC009268.1-201ENST00000561352 1203 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC027334.1-201ENST00000603257 310 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC004908.3-201ENST00000610248 625 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 RNA5SP440-201ENST00000612665 119 ntBASIC7.03□□□□□ -1.28
HLA-DOAP06340 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.03□□□□□ -1.28
HLA-DOAP06340 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HLA-DOAP06340 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC009831.5-201ENST00000624000 3189 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 RNA5SP211-201ENST00000365516 117 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC005522.1-201ENST00000395416 346 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL451046.1-201ENST00000406097 534 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL158053.1-201ENST00000441503 453 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 SDC4P-201ENST00000453285 601 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC023141.9-201ENST00000458734 412 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC093719.1-201ENST00000480427 441 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC007494.1-201ENST00000562293 760 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL132657.2-201ENST00000564417 358 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC010547.6-201ENST00000571789 193 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC015802.2-201ENST00000589690 189 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL357094.1-201ENST00000603845 844 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL683813.2-201ENST00000605245 502 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 AL391834.2-201ENST00000609982 546 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 MIR6886-201ENST00000619864 61 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC097655.1-201ENST00000635075 318 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC7.02□□□□□ -1.29
HLA-DOAP06340 AC020656.2-201ENST00000613291 5309 ntBASIC7.02□□□□□ -1.29
HLA-DOAP06340 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HLA-DOAP06340 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
HLA-DOAP06340 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms