Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SCN2BO60939 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN2BO60939 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 VTI1BP4-201ENST00000427516 527 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 GAPDHP48-201ENST00000436626 961 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN2BO60939 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 AC092865.4-201ENST00000477936 615 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 RN7SL568P-201ENST00000493069 298 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 AC091874.2-201ENST00000505889 720 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 AL158068.1-201ENST00000506116 616 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 LDHBP3-201ENST00000514909 822 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN2BO60939 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN2BO60939 AC092332.1-201ENST00000563684 829 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 HIRAP1-201ENST00000605318 787 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.51□□□□□ -1.53
SCN2BO60939 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.51□□□□□ -1.53
SCN2BO60939 MIR6721-201ENST00000617181 87 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 AC244100.4-201ENST00000617747 388 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 FAM27E2-201ENST00000619668 403 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.51□□□□□ -1.53
SCN2BO60939 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.51□□□□□ -1.53
SCN2BO60939 AC111152.1-202ENST00000635848 339 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SCN2BO60939 OR11H2-202ENST00000641517 1085 ntBASIC5.51□□□□□ -1.53
SCN2BO60939 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
SCN2BO60939 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SCN2BO60939 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SCN2BO60939 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SCN2BO60939 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.51□□□□□ -1.53
SCN2BO60939 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 AC007842.1-201ENST00000597336 2039 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SCN2BO60939 AC114774.1-201ENST00000507410 1770 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SCN2BO60939 AL161912.4-201ENST00000623889 2468 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN2BO60939 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN2BO60939 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 RNA5SP232-201ENST00000364144 119 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 RNU1-136P-201ENST00000384181 164 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 MIR130B-202ENST00000385018 82 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 RPL5P7-201ENST00000444235 813 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 EEF1B2P3-201ENST00000447718 678 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 HMGB1P7-201ENST00000450921 612 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN2BO60939 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN2BO60939 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.5□□□□□ -1.53
SCN2BO60939 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN2BO60939 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.5□□□□□ -1.53
SCN2BO60939 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SCN2BO60939 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN2BO60939 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.5□□□□□ -1.53
SCN2BO60939 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.5□□□□□ -1.53
SCN2BO60939 NANOGP3-201ENST00000605855 286 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 AL136131.3-201ENST00000607600 188 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN2BO60939 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SCN2BO60939 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.5□□□□□ -1.53
SCN2BO60939 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SCN2BO60939 AC097063.1-201ENST00000426714 1797 ntBASIC5.5□□□□□ -1.53
SCN2BO60939 SSXP3-201ENST00000442971 1300 ntBASIC5.49□□□□□ -1.53
SCN2BO60939 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SCN2BO60939 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms