Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL359091.1-201ENST00000449048 1734 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
LMX1BO60663 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LMX1BO60663 AC027575.3-201ENST00000583058 2747 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.31□□□□□ -1.56
LMX1BO60663 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LMX1BO60663 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 RN7SKP69-201ENST00000365390 305 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 RN7SKP81-201ENST00000365603 331 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AL096800.1-201ENST00000405326 893 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 MTCYBP32-201ENST00000427945 1084 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AL365220.1-201ENST00000432923 399 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 KATNBL1P2-201ENST00000433311 835 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AL512593.1-201ENST00000444758 779 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 PPIAP27-201ENST00000453800 265 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AC023194.2-201ENST00000465398 406 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AC098847.1-201ENST00000473094 348 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 MTATP6P1-201ENST00000514057 681 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 RN7SKP35-201ENST00000517210 151 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 SUMO2P19-201ENST00000518920 295 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.31□□□□□ -1.56
LMX1BO60663 OR4R2P-201ENST00000530815 597 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.31□□□□□ -1.56
LMX1BO60663 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.31□□□□□ -1.56
LMX1BO60663 CR383656.14-201ENST00000551951 406 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.31□□□□□ -1.56
LMX1BO60663 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 MRPS21P8-201ENST00000569196 235 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.31□□□□□ -1.56
LMX1BO60663 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.31□□□□□ -1.56
LMX1BO60663 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.31□□□□□ -1.56
LMX1BO60663 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.31□□□□□ -1.56
LMX1BO60663 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 AC022306.3-201ENST00000619930 550 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 AC024884.1-201ENST00000620583 399 ntBASIC5.31□□□□□ -1.56
LMX1BO60663 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LMX1BO60663 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.31□□□□□ -1.56
LMX1BO60663 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMX1BO60663 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LMX1BO60663 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.3□□□□□ -1.56
LMX1BO60663 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.3□□□□□ -1.56
LMX1BO60663 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.3□□□□□ -1.56
LMX1BO60663 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LMX1BO60663 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.3□□□□□ -1.56
LMX1BO60663 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LMX1BO60663 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.3□□□□□ -1.56
LMX1BO60663 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 AL161901.1-201ENST00000624954 3425 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.3□□□□□ -1.56
LMX1BO60663 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMX1BO60663 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LMX1BO60663 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LMX1BO60663 AL512422.1-201ENST00000407033 553 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.3□□□□□ -1.56
LMX1BO60663 SLC20A1P1-201ENST00000413906 956 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC073310.1-201ENST00000423226 1033 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 USP24P1-201ENST00000433802 779 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 ZFAND6P1-201ENST00000434138 605 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC094019.1-201ENST00000434678 472 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.3□□□□□ -1.56
LMX1BO60663 AC015908.1-201ENST00000478739 476 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC124945.1-201ENST00000485133 188 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 RN7SL101P-201ENST00000496350 279 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 RN7SL104P-201ENST00000498686 293 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 MORF4L2P1-201ENST00000503761 858 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC095052.1-201ENST00000509955 863 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 OR51A1P-201ENST00000511110 946 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 CYP4F27P-201ENST00000514557 494 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.3□□□□□ -1.56
LMX1BO60663 AC244502.2-201ENST00000543361 851 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC079905.1-201ENST00000549280 475 ntBASIC5.3□□□□□ -1.56
LMX1BO60663 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms