Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC188H7C350 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC188H7C350 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 AL080312.2-201ENST00000613001 630 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 GAPDHP41-201ENST00000613707 975 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RFPL4AP6-201ENST00000616792 846 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RBPJP7-201ENST00000442803 1447 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 RBPJP5-201ENST00000449433 1447 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC188H7C350 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC188H7C350 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC188H7C350 THAP12P8-201ENST00000447914 2115 ntBASIC6.04□□□□□ -1.44
CCDC188H7C350 AP001029.2-203ENST00000589795 4910 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AC016745.2-201ENST00000608834 3443 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC188H7C350 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 LINC01613-201ENST00000561476 2780 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CCDC188H7C350 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC188H7C350 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 SNORA70.6-201ENST00000383934 134 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 GPS2P1-201ENST00000411761 986 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AC079809.1-201ENST00000415468 276 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 RPL7AP14-201ENST00000424041 802 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 HMGB1P32-201ENST00000425971 565 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 GAPDHP19-201ENST00000431768 1005 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 UBE2V2P3-201ENST00000433562 437 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 RPL5P25-201ENST00000441148 775 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AL031681.1-201ENST00000443304 400 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AL445466.1-201ENST00000448432 357 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC188H7C350 RPS7P6-201ENST00000485777 579 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AC093325.1-201ENST00000508378 326 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC188H7C350 OR4A17P-201ENST00000526032 904 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 MIR212-201ENST00000586026 110 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC188H7C350 AL139099.4-201ENST00000614802 114 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AL162574.1-201ENST00000615702 950 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 AC021766.1-201ENST00000624404 741 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 ICE2P1-201ENST00000512800 1849 ntBASIC6.03□□□□□ -1.44
CCDC188H7C350 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC188H7C350 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC188H7C350 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC188H7C350 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC188H7C350 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC188H7C350 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
CCDC188H7C350 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC188H7C350 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC188H7C350 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC188H7C350 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC188H7C350 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC188H7C350 HSPD1P7-201ENST00000447985 1686 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC188H7C350 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC188H7C350 ARSFP1-201ENST00000398758 477 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC188H7C350 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC188H7C350 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC188H7C350 RNF10P1-201ENST00000418589 369 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 RPL12P43-201ENST00000420608 499 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 KIF4CP-201ENST00000422742 1279 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 AC108479.1-201ENST00000431142 427 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 ARMC4P1-201ENST00000438905 707 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC188H7C350 OR7E116P-201ENST00000448529 957 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC188H7C350 AL157777.1-201ENST00000468100 304 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC188H7C350 GOLGA5P1-201ENST00000507317 980 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 CCNHP1-201ENST00000513311 678 ntBASIC6.02□□□□□ -1.45
CCDC188H7C350 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms