Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 AP002884.5-201ENST00000595053 1132 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 RPL12P48-201ENST00000605620 304 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 uc_338.26-201ENST00000612659 160 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 RFPL4AP6-201ENST00000616792 846 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 RMST_5.1-201ENST00000618704 126 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 AL162233.1-201ENST00000620014 944 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 AC015722.2-201ENST00000622210 551 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 AC004808.2-201ENST00000627965 773 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.85□□□□□ -1.63
SRRM4A7MD48 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRRM4A7MD48 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.85□□□□□ -1.63
SRRM4A7MD48 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL161756.3-201ENST00000641216 2071 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL672167.2-201ENST00000377164 879 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 MIR191-201ENST00000384873 92 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL034417.1-201ENST00000399343 800 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 CR848007.2-201ENST00000424918 787 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 HNRNPA1P18-201ENST00000433537 927 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 HMGB3P10-201ENST00000434734 572 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 SEPT14P12-201ENST00000442280 560 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 OR7E22P-201ENST00000478335 1035 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 CR383658.1-201ENST00000514609 734 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 NPIPB14P-203ENST00000532298 987 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 MIR4701-201ENST00000583094 63 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AP001267.4-201ENST00000602598 545 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC073111.2-201ENST00000605657 1075 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AC007620.3-201ENST00000608131 497 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL159169.2-201ENST00000610061 1269 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL135999.3-201ENST00000610501 812 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 AL357562.1-201ENST00000624911 609 ntBASIC4.84□□□□□ -1.63
SRRM4A7MD48 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.84□□□□□ -1.63
SRRM4A7MD48 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRRM4A7MD48 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
SRRM4A7MD48 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRRM4A7MD48 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRRM4A7MD48 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
SRRM4A7MD48 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SRRM4A7MD48 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SRRM4A7MD48 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.84□□□□□ -1.64
SRRM4A7MD48 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRRM4A7MD48 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.84□□□□□ -1.64
SRRM4A7MD48 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SRRM4A7MD48 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRRM4A7MD48 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRRM4A7MD48 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SRRM4A7MD48 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRRM4A7MD48 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms