Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC009779.8-201ENST00000641684 4384 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC073429.2-201ENST00000569694 1444 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AL451142.1-201ENST00000375867 775 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 EIF4A1P7-201ENST00000421800 1220 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AL133173.1-201ENST00000423458 397 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC006335.2-201ENST00000437993 330 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 SPRYD7P1-201ENST00000443861 570 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AL450023.1-201ENST00000450868 751 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 RPL35AP19-201ENST00000469425 329 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 RN7SL184P-201ENST00000488308 297 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 DPPA3P2-201ENST00000553589 478 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 RBM22P12-201ENST00000567098 1255 ntBASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC144AA2RUR9 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 AC007342.5-201ENST00000571340 2142 ntBASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 VDAC2P4-201ENST00000452925 711 ntBASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 TOMM22P4-201ENST00000511318 336 ntBASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.28□□□□□ -1.08
CCDC144AA2RUR9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CCDC144AA2RUR9 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
CCDC144AA2RUR9 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 AC005225.5-201ENST00000623547 2225 ntBASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 AC093270.2-201ENST00000486157 792 ntBASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 DPPA3P2-202ENST00000557188 1219 ntBASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 MIR8080-201ENST00000622224 89 ntBASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC144AA2RUR9 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 SNORA70-201ENST00000384436 135 ntBASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 GAPDHP42-201ENST00000406848 981 ntBASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 GAPDHP58-201ENST00000438477 1006 ntBASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 RANP1-206ENST00000455094 651 ntBASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 AC100832.1-201ENST00000471945 383 ntBASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 RN7SL547P-201ENST00000490793 290 ntBASIC8.26□□□□□ -1.09
CCDC144AA2RUR9 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms