Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 MT-TP-201ENST00000387461 68 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 RPL5P19-201ENST00000404228 893 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 RN7SKP188-201ENST00000410789 317 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 MTND2P5-201ENST00000432656 1006 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 RPSAP32-201ENST00000432681 526 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 UBBP5-201ENST00000446970 266 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 RPL23AP28-201ENST00000448062 470 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC107398.1-201ENST00000486904 505 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC073610.1-201ENST00000489971 396 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 SUMO2P4-201ENST00000504193 276 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC013701.1-201ENST00000522657 465 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC140063.1-201ENST00000541343 259 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC090826.1-203ENST00000569235 490 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC073387.2-201ENST00000604797 784 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 OR8G7P-201ENST00000616658 848 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AP000484.1-201ENST00000620067 1252 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC073593.1-201ENST00000624500 411 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AL035425.4-201ENST00000624509 1063 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 OLMALINC-203ENST00000641087 3779 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 AC010168.2-201ENST00000562691 5428 ntBASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.37□□□□□ -1.39
PCDHGA6Q9Y5G7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 RNU6-1263P-201ENST00000384601 106 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 ATP5HP3-201ENST00000396994 486 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 SNORA11.3-201ENST00000408471 128 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 GPN3P1-201ENST00000423883 535 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AL390879.1-201ENST00000439143 386 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AL096803.2-201ENST00000450032 677 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC008280.2-201ENST00000455473 307 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 RPS20P4-201ENST00000461659 355 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC021205.1-201ENST00000468797 348 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 RN7SL413P-201ENST00000482700 297 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 RPL37P23-201ENST00000492641 294 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC093720.1-201ENST00000505681 714 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC093816.1-201ENST00000515076 913 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AC091163.3-201ENST00000518269 1144 ntBASIC6.36□□□□□ -1.39
PCDHGA6Q9Y5G7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms