Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 CST12P-201ENST00000457644 362 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 PFN1P6-201ENST00000476786 399 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 RPL38P3-201ENST00000484463 213 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC027369.2-201ENST00000528030 440 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AL121839.2-201ENST00000565058 6943 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 MIR4310-201ENST00000582950 57 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC090236.2-201ENST00000587933 1101 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC067773.1-201ENST00000603284 1094 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC108673.3-201ENST00000609183 335 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 SNORA11.6-201ENST00000619030 128 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AL157762.1-201ENST00000619612 415 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AL359742.1-201ENST00000622497 540 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 AC022400.9-201ENST00000623633 273 ntBASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4BQ9Y4P1 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 CASC19-238ENST00000641523 1558 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 VN1R3-201ENST00000418822 919 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC079807.1-201ENST00000429993 481 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 USP24P1-201ENST00000433802 779 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AL663074.2-201ENST00000440621 479 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 EIF5AP4-201ENST00000441206 465 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 MTCO3P17-201ENST00000443775 513 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC144530.1-201ENST00000452862 555 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 GEMIN2P1-201ENST00000454246 752 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 RN7SKP67-201ENST00000515905 235 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AP003396.4-201ENST00000527574 265 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC007956.1-201ENST00000555623 542 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC007346.2-201ENST00000564816 892 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AP005901.4-201ENST00000577336 569 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AL365181.4-201ENST00000609800 547 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC096586.2-201ENST00000610260 441 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 MAPK10-350ENST00000641777 965 ntBASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4BQ9Y4P1 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AF287957.1-201ENST00000607368 1595 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.59□□□□□ -1.51
ATG4BQ9Y4P1 AL929601.4-201ENST00000613011 1341 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms