Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 MTCO1P46-201ENST00000451639 1491 ntBASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RHBDD3Q9Y3P4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 RPL12P12-201ENST00000424633 501 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC130360.1-201ENST00000425489 1117 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 ARAFP2-201ENST00000440565 559 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 RSU1P1-201ENST00000453416 441 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SL362P-201ENST00000494228 267 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC112484.3-201ENST00000505910 329 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 MAST4-IT1-201ENST00000514241 658 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 RNU6-943P-201ENST00000516960 98 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AP000859.1-201ENST00000525536 307 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC130365.2-201ENST00000525882 1201 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AP003033.2-201ENST00000528901 805 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC121758.1-202ENST00000556917 658 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 MIR4701-201ENST00000583094 63 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AL645933.2-201ENST00000606743 1207 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC092681.3-201ENST00000609463 678 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 Z95327.3-201ENST00000610385 572 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 uc_338.26-201ENST00000612659 160 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC073575.2-201ENST00000614212 627 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AL512652.1-201ENST00000619006 500 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AL109924.4-201ENST00000623089 670 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 Z83820.1-201ENST00000456978 1499 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 BCORP1-203ENST00000513194 5093 ntBASIC5.18□□□□□ -1.58
RHBDD3Q9Y3P4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SKP128-201ENST00000364270 303 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 MIR137-201ENST00000385223 102 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 RN7SKP17-201ENST00000411242 351 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 MYL6P5-201ENST00000412707 459 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC023141.3-201ENST00000436698 278 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC096632.2-201ENST00000438139 1239 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 FTLP8-201ENST00000446770 267 ntBASIC5.17□□□□□ -1.58
RHBDD3Q9Y3P4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms