Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 AC011503.2-201ENST00000594230 1500 ntBASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
KCNIP3Q9Y2W7 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC009220.2-201ENST00000489759 1751 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC010894.1-201ENST00000313760 361 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RNU1-5P-201ENST00000362684 144 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RN7SKP185-201ENST00000362813 326 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RNA5SP156-201ENST00000410250 110 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RNA5SP155-201ENST00000411154 129 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AL161742.1-201ENST00000418154 584 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RPL12P12-201ENST00000424633 501 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC112492.2-201ENST00000432774 1030 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 MTND2P40-201ENST00000436718 841 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 MTND6P5-201ENST00000448266 512 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ABCC13-202ENST00000463099 3842 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 EIF3LP3-201ENST00000495197 822 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 CYCSP25-201ENST00000525280 316 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 VDAC2P2-201ENST00000544463 901 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC026898.1-201ENST00000586404 571 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 NDUFB9P1-201ENST00000604683 510 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AL353807.4-201ENST00000604995 257 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AL353729.2-201ENST00000605859 1249 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC022106.1-201ENST00000612834 766 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 AC004023.1-201ENST00000561473 1744 ntBASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KCNIP3Q9Y2W7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KCNIP3Q9Y2W7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
KCNIP3Q9Y2W7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.9□□□□□ -1.62
KCNIP3Q9Y2W7 AL034546.1-201ENST00000623740 3693 ntBASIC4.9□□□□□ -1.62
KCNIP3Q9Y2W7 SMG1P4-204ENST00000523028 4131 ntBASIC4.9□□□□□ -1.62
KCNIP3Q9Y2W7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
KCNIP3Q9Y2W7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KCNIP3Q9Y2W7 AC092681.1-201ENST00000297369 291 ntBASIC4.9□□□□□ -1.63
KCNIP3Q9Y2W7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms