Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 AC131392.2-201ENST00000505635 4332 ntBASIC8.71□□□□□ -1.01
ZC3H4Q9UPT8 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AL022163.1-201ENST00000430261 1569 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 OR56B2P-201ENST00000317102 954 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 RNA5SP85-201ENST00000365378 119 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 ELOCP10-201ENST00000440624 327 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AL137845.2-201ENST00000444292 988 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 KATNBL1P6-201ENST00000453433 915 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC013787.1-201ENST00000460165 307 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 RPL31P58-201ENST00000469001 379 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 GAPDHP36-201ENST00000480688 918 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC037479.1-201ENST00000558361 625 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 ROCK1P1-201ENST00000573767 549 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC011260.1-201ENST00000578420 472 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC112230.1-201ENST00000604342 547 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 ELOCP34-201ENST00000604436 327 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 RNU4-89P-201ENST00000607443 133 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC013476.2-201ENST00000614456 459 ntBASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ZC3H4Q9UPT8 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 CUL4AP1-201ENST00000514750 1863 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 Z99129.4-201ENST00000624649 2435 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL096816.1-201ENST00000623300 2920 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 RNA5SP308-201ENST00000362532 115 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 RNA5SP433-201ENST00000364491 114 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 RN7SKP237-201ENST00000364663 301 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 Y_RNA.390-201ENST00000383932 102 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 DNAJC19P6-201ENST00000401853 280 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 RNA5SP431-201ENST00000410312 120 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 RPL7P8-201ENST00000411964 730 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 PSMD10P2-201ENST00000432890 672 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL590103.1-201ENST00000434488 307 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 MYL6P3-201ENST00000436904 432 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 AL353754.1-201ENST00000440219 340 ntBASIC8.7□□□□□ -1.02
ZC3H4Q9UPT8 MTND1P30-201ENST00000441241 901 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms